Analysis of interatomic Contacts of Structural Units in PDB entry:
9HJ7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9HJ7 entry

There are 2 chains in PDB entry 9HJ7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 21ASP 311
B
 GLN 21ASP 311
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 9HJ7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
40 46Right-handed alpha
Helix 2
AA2
A
83 96Right-handed alpha
Helix 3
AA3
A
115 130Right-handed alpha
Helix 4
AA4
A
158 170Right-handed alpha
Helix 5
AA5
A
191 198Right-handed alpha
Helix 6
AA6
A
223 232Right-handed alpha
Helix 7
AA7
A
247 251Right-handed 310
Helix 8
AA8
A
257 265Right-handed alpha
Helix 9
AA9
A
266 271Right-handed alpha
Helix 10
AB1
A
282 289Right-handed alpha
Helix 11
AB2
A
296 307Right-handed alpha
Helix 12
AB3
B
40 46Right-handed alpha
Helix 13
AB4
B
83 96Right-handed alpha
Helix 14
AB5
B
115 130Right-handed alpha
Helix 15
AB6
B
158 170Right-handed alpha
Helix 16
AB7
B
191 198Right-handed alpha
Helix 17
AB8
B
223 232Right-handed alpha
Helix 18
AB9
B
247 251Right-handed 310
Helix 19
AC1
B
257 265Right-handed alpha
Helix 20
AC2
B
266 271Right-handed alpha
Helix 21
AC3
B
282 289Right-handed alpha
Helix 22
AC4
B
296 307Right-handed alpha
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There are 2 sheets in PDB entry 9HJ7. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 66first strand
Strand 2
A
110 111first strand
Strand 3
A
25 30first strand
Strand 4
A
275 281parallel
Strand 5
A
239 245parallel
Strand 6
A
202 206parallel
Strand 7
A
177 180parallel
Strand 8
A
147 151parallel
Strand 9
A
99 105parallel
Strand 10
A
52 61parallel
Strand 11
A
110 111parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 66first strand
Strand 2
B
110 111first strand
Strand 3
B
25 30first strand
Strand 4
B
275 281parallel
Strand 5
B
239 245parallel
Strand 6
B
202 206parallel
Strand 7
B
177 180parallel
Strand 8
B
147 151parallel
Strand 9
B
99 105parallel
Strand 10
B
52 61parallel
Strand 11
B
110 111parallel
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