Analysis of interatomic Contacts of Structural Units in PDB entry:
9HJX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9HJX entry

There are 6 chains in PDB entry 9HJX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 92
B
 MET 1LEU 450
C
 MET 1LEU 372
D
 MET 1ARG 92
E
 MET 1LEU 450
F
 MET 1GLY 373
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 74 helices in PDB entry 9HJX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 24Right-handed alpha
Helix 2
AA2
A
27 29Right-handed 310
Helix 3
AA3
A
30 42Right-handed alpha
Helix 4
AA4
A
44 55Right-handed alpha
Helix 5
AA5
A
59 89Right-handed alpha
Helix 6
AA6
B
2 23Right-handed alpha
Helix 7
AA7
B
27 47Right-handed alpha
Helix 8
AA8
B
54 75Right-handed alpha
Helix 9
AA9
B
80 107Right-handed alpha
Helix 10
AB1
B
111 141Right-handed alpha
Helix 11
AB2
B
152 171Right-handed alpha
Helix 12
AB3
B
176 196Right-handed alpha
Helix 13
AB4
B
202 226Right-handed alpha
Helix 14
AB5
B
227 252Right-handed alpha
Helix 15
AB6
B
255 262Right-handed alpha
Helix 16
AB7
B
281 291Right-handed alpha
Helix 17
AB8
B
300 307Right-handed alpha
Helix 18
AB9
B
308 322Right-handed alpha
Helix 19
AC1
B
339 349Right-handed alpha
Helix 20
AC2
B
361 365Right-handed 310
Helix 21
AC3
B
381 385Right-handed 310
Helix 22
AC4
B
435 450Right-handed alpha
Helix 23
AC5
C
20 31Right-handed alpha
Helix 24
AC6
C
39 43Right-handed 310
Helix 25
AC7
C
47 55Right-handed alpha
Helix 26
AC8
C
78 84Right-handed alpha
Helix 27
AC9
C
100 111Right-handed alpha
Helix 28
AD1
C
118 120Right-handed 310
Helix 29
AD2
C
123 127Right-handed 310
Helix 30
AD3
C
130 151Right-handed alpha
Helix 31
AD4
C
176 190Right-handed alpha
Helix 32
AD5
C
199 209Right-handed alpha
Helix 33
AD6
C
234 247Right-handed alpha
Helix 34
AD7
C
268 275Right-handed alpha
Helix 35
AD8
C
318 335Right-handed alpha
Helix 36
AD9
C
349 354Right-handed alpha
Helix 37
AE1
C
365 372Right-handed alpha
Helix 38
AE2
D
4 25Right-handed alpha
Helix 39
AE3
D
27 29Right-handed 310
Helix 40
AE4
D
30 42Right-handed alpha
Helix 41
AE5
D
44 55Right-handed alpha
Helix 42
AE6
D
58 90Right-handed alpha
Helix 43
AE7
E
3 22Right-handed alpha
Helix 44
AE8
E
27 47Right-handed alpha
Helix 45
AE9
E
54 75Right-handed alpha
Helix 46
AF1
E
77 79Right-handed 310
Helix 47
AF2
E
80 107Right-handed alpha
Helix 48
AF3
E
111 141Right-handed alpha
Helix 49
AF4
E
152 171Right-handed alpha
Helix 50
AF5
E
176 195Right-handed alpha
Helix 51
AF6
E
202 226Right-handed alpha
Helix 52
AF7
E
227 252Right-handed alpha
Helix 53
AF8
E
281 291Right-handed alpha
Helix 54
AF9
E
300 307Right-handed alpha
Helix 55
AG1
E
308 323Right-handed alpha
Helix 56
AG2
E
339 349Right-handed alpha
Helix 57
AG3
E
351 353Right-handed 310
Helix 58
AG4
E
357 362Right-handed alpha
Helix 59
AG5
E
364 368Right-handed 310
Helix 60
AG6
E
377 385Right-handed 310
Helix 61
AG7
E
398 402Right-handed 310
Helix 62
AG8
E
435 450Right-handed alpha
Helix 63
AG9
F
20 30Right-handed alpha
Helix 64
AH1
F
47 55Right-handed alpha
Helix 65
AH2
F
78 84Right-handed alpha
Helix 66
AH3
F
100 111Right-handed alpha
Helix 67
AH4
F
130 151Right-handed alpha
Helix 68
AH5
F
176 189Right-handed alpha
Helix 69
AH6
F
200 210Right-handed alpha
Helix 70
AH7
F
237 249Right-handed alpha
Helix 71
AH8
F
313 318Right-handed alpha
Helix 72
AH9
F
318 335Right-handed alpha
Helix 73
AI1
F
349 355Right-handed alpha
Helix 74
AI2
F
365 373Right-handed alpha
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There are 9 sheets in PDB entry 9HJX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
355 357first strand
Strand 2
B
325 330parallel
Strand 3
B
294 299parallel
Strand 4
B
370 374parallel
Strand 5
B
405 409parallel
Strand 6
B
429 433parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
57 59first strand
Strand 2
C
33 37parallel
Strand 3
C
3 6parallel
Strand 4
C
70 72parallel
Strand 5
C
90 93parallel
Strand 6
C
113 116parallel
Strand 7
C
356 358anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
158 159first strand
Strand 2
C
164 165anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
212 213first strand
Strand 2
C
192 196parallel
Strand 3
C
169 173parallel
Strand 4
C
251 254parallel
Strand 5
C
280 283parallel
Strand 6
C
306 310parallel
Strand 7
C
299 303anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
355 356first strand
Strand 2
E
325 329parallel
Strand 3
E
294 299parallel
Strand 4
E
370 374parallel
Strand 5
E
404 408parallel
Strand 6
E
429 432parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
57 59first strand
Strand 2
F
33 37parallel
Strand 3
F
3 6parallel
Strand 4
F
70 72parallel
Strand 5
F
90 93parallel
Strand 6
F
113 116parallel
Strand 7
F
356 359anti-parallel
Strand 8
F
362 363anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
158 160first strand
Strand 2
F
163 165anti-parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
212 213first strand
Strand 2
F
192 195parallel
Strand 3
F
169 173parallel
Strand 4
F
251 254parallel
Strand 5
F
280 283parallel
Strand 6
F
306 309parallel
Strand 7
F
300 303anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
338 339first strand
Strand 2
F
342 343anti-parallel
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