Analysis of interatomic Contacts of Structural Units in PDB entry:
9HKL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9HKL entry

There are 3 chains in PDB entry 9HKL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 55LYS 575
B
 ALA 56ARG 574
C
 SER 57GLU 577
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 74 helices in PDB entry 9HKL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
59 80Right-handed alpha
Helix 2
AA2
A
80 120Right-handed alpha
Helix 3
AA3
A
121 125Right-handed 310
Helix 4
AA4
A
137 147Right-handed alpha
Helix 5
AA5
A
151 169Right-handed alpha
Helix 6
AA6
A
177 188Right-handed alpha
Helix 7
AA7
A
191 209Right-handed alpha
Helix 8
AA8
A
217 220Right-handed 310
Helix 9
AA9
A
221 232Right-handed alpha
Helix 10
AB1
A
232 268Right-handed alpha
Helix 11
AB2
A
275 296Right-handed alpha
Helix 12
AB3
A
299 324Right-handed alpha
Helix 13
AB4
A
325 343Right-handed alpha
Helix 14
AB5
A
343 349Right-handed alpha
Helix 15
AB6
A
353 358Right-handed alpha
Helix 16
AB7
A
359 366Right-handed alpha
Helix 17
AB8
A
366 377Right-handed alpha
Helix 18
AB9
A
377 388Right-handed alpha
Helix 19
AC1
A
393 426Right-handed alpha
Helix 20
AC2
A
435 437Right-handed 310
Helix 21
AC3
A
438 445Right-handed alpha
Helix 22
AC4
A
449 480Right-handed alpha
Helix 23
AC5
A
488 511Right-handed alpha
Helix 24
AC6
A
513 546Right-handed alpha
Helix 25
AC7
A
547 549Right-handed 310
Helix 26
AC8
A
550 575Right-handed alpha
Helix 27
AC9
B
59 80Right-handed alpha
Helix 28
AD1
B
80 120Right-handed alpha
Helix 29
AD2
B
121 125Right-handed 310
Helix 30
AD3
B
137 145Right-handed alpha
Helix 31
AD4
B
150 169Right-handed alpha
Helix 32
AD5
B
177 188Right-handed alpha
Helix 33
AD6
B
191 209Right-handed alpha
Helix 34
AD7
B
216 221Right-handed alpha
Helix 35
AD8
B
221 232Right-handed alpha
Helix 36
AD9
B
232 268Right-handed alpha
Helix 37
AE1
B
274 279Right-handed alpha
Helix 38
AE2
B
279 294Right-handed alpha
Helix 39
AE3
B
300 324Right-handed alpha
Helix 40
AE4
B
325 343Right-handed alpha
Helix 41
AE5
B
343 349Right-handed alpha
Helix 42
AE6
B
359 366Right-handed alpha
Helix 43
AE7
B
366 388Right-handed alpha
Helix 44
AE8
B
393 427Right-handed alpha
Helix 45
AE9
B
435 437Right-handed 310
Helix 46
AF1
B
438 447Right-handed alpha
Helix 47
AF2
B
449 480Right-handed alpha
Helix 48
AF3
B
488 511Right-handed alpha
Helix 49
AF4
B
513 526Right-handed alpha
Helix 50
AF5
B
526 546Right-handed alpha
Helix 51
AF6
B
547 574Right-handed alpha
Helix 52
AF7
C
59 80Right-handed alpha
Helix 53
AF8
C
80 120Right-handed alpha
Helix 54
AF9
C
121 125Right-handed 310
Helix 55
AG1
C
137 144Right-handed alpha
Helix 56
AG2
C
145 147Right-handed 310
Helix 57
AG3
C
151 169Right-handed alpha
Helix 58
AG4
C
177 188Right-handed alpha
Helix 59
AG5
C
191 210Right-handed alpha
Helix 60
AG6
C
217 220Right-handed 310
Helix 61
AG7
C
221 231Right-handed alpha
Helix 62
AG8
C
232 268Right-handed alpha
Helix 63
AG9
C
275 296Right-handed alpha
Helix 64
AH1
C
299 324Right-handed alpha
Helix 65
AH2
C
325 349Right-handed alpha
Helix 66
AH3
C
359 366Right-handed alpha
Helix 67
AH4
C
366 389Right-handed alpha
Helix 68
AH5
C
393 427Right-handed alpha
Helix 69
AH6
C
435 437Right-handed 310
Helix 70
AH7
C
438 447Right-handed alpha
Helix 71
AH8
C
449 481Right-handed alpha
Helix 72
AH9
C
488 511Right-handed alpha
Helix 73
AI1
C
513 546Right-handed alpha
Helix 74
AI2
C
547 576Right-handed alpha
Back to top of page
There are no sheets in PDB entry 9HKL
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il