Analysis of interatomic Contacts of Structural Units in PDB entry:
9HL5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9HL5 entry

There is 1 chain in PDB entry 9HL5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 20ALA 287
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 9HL5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
70 74Right-handed 310
Helix 2
AA2
A
88 91Right-handed 310
Helix 3
AA3
A
92 102Right-handed alpha
Helix 4
AA4
A
117 132Right-handed alpha
Helix 5
AA5
A
153 163Right-handed alpha
Helix 6
AA6
A
184 191Right-handed 310
Helix 7
AA7
A
207 212Right-handed alpha
Helix 8
AA8
A
212 219Right-handed alpha
Helix 9
AA9
A
240 242Right-handed 310
Helix 10
AB1
A
243 257Right-handed alpha
Helix 11
AB2
A
258 260Right-handed 310
Helix 12
AB3
A
261 266Right-handed alpha
Helix 13
AB4
A
271 275Right-handed 310
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There are 2 sheets in PDB entry 9HL5. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 57first strand
Strand 2
A
61 66anti-parallel
Strand 3
A
105 109anti-parallel
Strand 4
A
76 82parallel
Strand 5
A
142 152parallel
Strand 6
A
170 174parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 200first strand
Strand 2
A
223 228parallel
Strand 3
A
278 283anti-parallel
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