Analysis of interatomic Contacts of Structural Units in PDB entry:
9HLE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9HLE entry

There are 3 chains in PDB entry 9HLE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 47GLN 314
B
 ASP 43GLN 314
C
 LYS 41SER 313
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 9HLE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
47 77Right-handed alpha
Helix 2
AA2
A
95 109Right-handed alpha
Helix 3
AA3
A
120 125Right-handed alpha
Helix 4
AA4
A
128 136Right-handed alpha
Helix 5
AA5
A
137 141Right-handed 310
Helix 6
AA6
A
153 167Right-handed alpha
Helix 7
AA7
A
178 192Right-handed alpha
Helix 8
AA8
A
224 236Right-handed alpha
Helix 9
AA9
A
237 239Right-handed 310
Helix 10
AB1
A
255 263Right-handed alpha
Helix 11
AB2
A
263 268Right-handed alpha
Helix 12
AB3
A
278 296Right-handed alpha
Helix 13
AB4
B
44 78Right-handed alpha
Helix 14
AB5
B
95 109Right-handed alpha
Helix 15
AB6
B
120 126Right-handed alpha
Helix 16
AB7
B
128 137Right-handed alpha
Helix 17
AB8
B
153 167Right-handed alpha
Helix 18
AB9
B
178 192Right-handed alpha
Helix 19
AC1
B
223 236Right-handed alpha
Helix 20
AC2
B
237 239Right-handed 310
Helix 21
AC3
B
255 263Right-handed alpha
Helix 22
AC4
B
263 268Right-handed alpha
Helix 23
AC5
B
278 296Right-handed alpha
Helix 24
AC6
C
42 77Right-handed alpha
Helix 25
AC7
C
95 109Right-handed alpha
Helix 26
AC8
C
120 126Right-handed alpha
Helix 27
AC9
C
128 137Right-handed alpha
Helix 28
AD1
C
153 167Right-handed alpha
Helix 29
AD2
C
178 192Right-handed alpha
Helix 30
AD3
C
218 220Right-handed 310
Helix 31
AD4
C
221 236Right-handed alpha
Helix 32
AD5
C
237 239Right-handed 310
Helix 33
AD6
C
255 263Right-handed alpha
Helix 34
AD7
C
263 268Right-handed alpha
Helix 35
AD8
C
278 296Right-handed alpha
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There are 3 sheets in PDB entry 9HLE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 198first strand
Strand 2
A
112 119anti-parallel
Strand 3
A
85 90parallel
Strand 4
A
208 212parallel
Strand 5
A
242 245parallel
Strand 6
A
271 273parallel
Strand 7
A
300 301parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
195 198first strand
Strand 2
B
112 119anti-parallel
Strand 3
B
85 90parallel
Strand 4
B
208 212parallel
Strand 5
B
242 245parallel
Strand 6
B
271 273parallel
Strand 7
B
300 301parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
195 198first strand
Strand 2
C
112 119anti-parallel
Strand 3
C
85 90parallel
Strand 4
C
208 212parallel
Strand 5
C
242 245parallel
Strand 6
C
271 273parallel
Strand 7
C
300 301parallel
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