Analysis of interatomic Contacts of Structural Units in PDB entry:
9HLL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9HLL entry

There are 4 chains in PDB entry 9HLL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 148LEU 328
B
 GLN 2SER 123
C
 GLN 2SER 123
D
 GLN 2HIS 126
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 9HLL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
162 180Right-handed alpha
Helix 2
AA2
A
201 208Right-handed alpha
Helix 3
AA3
A
210 216Right-handed alpha
Helix 4
AA4
A
226 237Right-handed alpha
Helix 5
AA5
A
240 244Right-handed 310
Helix 6
AA6
A
267 270Right-handed 310
Helix 7
AA7
A
271 278Right-handed alpha
Helix 8
AA8
A
293 304Right-handed alpha
Helix 9
AA9
A
307 310Right-handed 310
Helix 10
AB1
A
318 328Right-handed alpha
Helix 11
AB2
B
29 31Right-handed 310
Helix 12
AB3
B
87 91Right-handed 310
Helix 13
AB4
C
29 31Right-handed 310
Helix 14
AB5
C
87 91Right-handed 310
Helix 15
AB6
C
102 104Right-handed 310
Helix 16
AB7
D
29 31Right-handed 310
Helix 17
AB8
D
87 91Right-handed 310
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There are 10 sheets in PDB entry 9HLL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 200first strand
Strand 2
A
185 192anti-parallel
Strand 3
A
149 156parallel
Strand 4
A
250 257parallel
Strand 5
A
280 286parallel
Strand 6
A
312 314parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 8first strand
Strand 2
B
19 26anti-parallel
Strand 3
B
78 83anti-parallel
Strand 4
B
68 73anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 14first strand
Strand 2
B
117 122parallel
Strand 3
B
92 100anti-parallel
Strand 4
B
33 40anti-parallel
Strand 5
B
47 52anti-parallel
Strand 6
B
58 60anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 14first strand
Strand 2
B
117 122parallel
Strand 3
B
92 100anti-parallel
Strand 4
B
112 113anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
4 8first strand
Strand 2
C
19 26anti-parallel
Strand 3
C
78 83anti-parallel
Strand 4
C
68 73anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
11 14first strand
Strand 2
C
117 122parallel
Strand 3
C
92 100anti-parallel
Strand 4
C
33 40anti-parallel
Strand 5
C
47 53anti-parallel
Strand 6
C
57 60anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
11 14first strand
Strand 2
C
117 122parallel
Strand 3
C
92 100anti-parallel
Strand 4
C
112 113anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4 8first strand
Strand 2
D
19 26anti-parallel
Strand 3
D
78 83anti-parallel
Strand 4
D
68 73anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
11 14first strand
Strand 2
D
117 122parallel
Strand 3
D
92 100anti-parallel
Strand 4
D
33 40anti-parallel
Strand 5
D
47 53anti-parallel
Strand 6
D
57 60anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
11 14first strand
Strand 2
D
117 122parallel
Strand 3
D
92 100anti-parallel
Strand 4
D
112 113anti-parallel
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