Analysis of interatomic Contacts of Structural Units in PDB entry:
9HLW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9HLW entry

There are 4 chains in PDB entry 9HLW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 56ALA 750
E
 HIS 56ALA 750
H
 GLN 1SER 126
Q
 GLN 1SER 126
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 9HLW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
57 63Right-handed alpha
Helix 2
AA2
A
66 78Right-handed alpha
Helix 3
AA3
A
86 104Right-handed alpha
Helix 4
AA4
A
181 191Right-handed alpha
Helix 5
AA5
A
209 220Right-handed alpha
Helix 6
AA6
A
230 235Right-handed alpha
Helix 7
AA7
A
298 304Right-handed alpha
Helix 8
AA8
A
388 409Right-handed alpha
Helix 9
AA9
A
430 438Right-handed alpha
Helix 10
AB1
A
438 445Right-handed alpha
Helix 11
AB2
A
470 479Right-handed alpha
Helix 12
AB3
A
492 501Right-handed alpha
Helix 13
AB4
A
521 526Right-handed alpha
Helix 14
AB5
A
558 566Right-handed alpha
Helix 15
AB6
A
570 590Right-handed alpha
Helix 16
AB7
A
596 616Right-handed alpha
Helix 17
AB8
A
618 626Right-handed alpha
Helix 18
AB9
A
629 653Right-handed alpha
Helix 19
AC1
A
657 670Right-handed alpha
Helix 20
AC2
A
671 676Right-handed 310
Helix 21
AC3
A
705 712Right-handed alpha
Helix 22
AC4
A
720 746Right-handed alpha
Helix 23
AC5
E
57 63Right-handed alpha
Helix 24
AC6
E
66 78Right-handed alpha
Helix 25
AC7
E
86 104Right-handed alpha
Helix 26
AC8
E
181 193Right-handed alpha
Helix 27
AC9
E
209 220Right-handed alpha
Helix 28
AD1
E
230 235Right-handed alpha
Helix 29
AD2
E
298 304Right-handed alpha
Helix 30
AD3
E
388 409Right-handed alpha
Helix 31
AD4
E
430 438Right-handed alpha
Helix 32
AD5
E
438 445Right-handed alpha
Helix 33
AD6
E
470 479Right-handed alpha
Helix 34
AD7
E
492 501Right-handed alpha
Helix 35
AD8
E
521 526Right-handed alpha
Helix 36
AD9
E
558 566Right-handed alpha
Helix 37
AE1
E
570 590Right-handed alpha
Helix 38
AE2
E
596 617Right-handed alpha
Helix 39
AE3
E
618 626Right-handed alpha
Helix 40
AE4
E
629 653Right-handed alpha
Helix 41
AE5
E
657 670Right-handed alpha
Helix 42
AE6
E
671 676Right-handed 310
Helix 43
AE7
E
705 712Right-handed alpha
Helix 44
AE8
E
720 746Right-handed alpha
Helix 45
AE9
H
110 114Right-handed 310
Helix 46
AF1
Q
110 114Right-handed 310
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There are 15 sheets in PDB entry 9HLW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 119first strand
Strand 2
A
349 362anti-parallel
Strand 3
A
414 421anti-parallel
Strand 4
A
367 377parallel
Strand 5
A
446 451parallel
Strand 6
A
531 538parallel
Strand 7
A
461 466anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 140first strand
Strand 2
A
128 131anti-parallel
Strand 3
A
341 344anti-parallel
Strand 4
A
171 172anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 163first strand
Strand 2
A
256 257parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 204first strand
Strand 2
A
224 228parallel
Strand 3
A
294 297parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
107 119first strand
Strand 2
E
349 362anti-parallel
Strand 3
E
414 421anti-parallel
Strand 4
E
367 377parallel
Strand 5
E
446 451parallel
Strand 6
E
531 538parallel
Strand 7
E
461 466anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
137 140first strand
Strand 2
E
128 131anti-parallel
Strand 3
E
341 344anti-parallel
Strand 4
E
171 172anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
162 163first strand
Strand 2
E
256 257parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
174 176first strand
Strand 2
E
200 204parallel
Strand 3
E
224 228parallel
Strand 4
E
294 297parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
6 7first strand
Strand 2
H
18 23anti-parallel
Strand 3
H
78 83anti-parallel
Strand 4
H
68 72anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
11 12first strand
Strand 2
H
123 124parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
31 32first strand
Strand 2
H
100 101anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
57 60first strand
Strand 2
H
45 52anti-parallel
Strand 3
H
35 39anti-parallel
Strand 4
H
93 98anti-parallel
Strand 5
H
116 117anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
6 7first strand
Strand 2
Q
17 23anti-parallel
Strand 3
Q
78 84anti-parallel
Strand 4
Q
68 72anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
31 32first strand
Strand 2
Q
100 101anti-parallel
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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
57 60first strand
Strand 2
Q
45 52anti-parallel
Strand 3
Q
35 39anti-parallel
Strand 4
Q
93 98anti-parallel
Strand 5
Q
116 117anti-parallel
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