Analysis of interatomic Contacts of Structural Units in PDB entry:
9HLX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9HLX entry

There are 2 chains in PDB entry 9HLX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLN 1160
B
 A 11 C 51
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 58 helices in PDB entry 9HLX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 29Right-handed alpha
Helix 2
AA2
A
34 54Right-handed alpha
Helix 3
AA3
A
70 78Right-handed alpha
Helix 4
AA4
A
78 93Right-handed alpha
Helix 5
AA5
A
105 109Right-handed 310
Helix 6
AA6
A
111 136Right-handed alpha
Helix 7
AA7
A
139 155Right-handed alpha
Helix 8
AA8
A
159 169Right-handed alpha
Helix 9
AA9
A
178 202Right-handed alpha
Helix 10
AB1
A
217 222Right-handed alpha
Helix 11
AB2
A
227 238Right-handed alpha
Helix 12
AB3
A
242 250Right-handed 310
Helix 13
AB4
A
255 268Right-handed alpha
Helix 14
AB5
A
281 285Right-handed 310
Helix 15
AB6
A
292 313Right-handed alpha
Helix 16
AB7
A
316 323Right-handed alpha
Helix 17
AB8
A
332 356Right-handed alpha
Helix 18
AB9
A
358 384Right-handed alpha
Helix 19
AC1
A
384 419Right-handed alpha
Helix 20
AC2
A
443 453Right-handed alpha
Helix 21
AC3
A
471 481Right-handed alpha
Helix 22
AC4
A
482 486Right-handed 310
Helix 23
AC5
A
488 494Right-handed alpha
Helix 24
AC6
A
495 498Right-handed 310
Helix 25
AC7
A
509 514Right-handed 310
Helix 26
AC8
A
516 530Right-handed alpha
Helix 27
AC9
A
530 537Right-handed alpha
Helix 28
AD1
A
540 548Right-handed alpha
Helix 29
AD2
A
555 567Right-handed alpha
Helix 30
AD3
A
577 587Right-handed alpha
Helix 31
AD4
A
607 618Right-handed alpha
Helix 32
AD5
A
618 624Right-handed alpha
Helix 33
AD6
A
685 698Right-handed alpha
Helix 34
AD7
A
699 700Right-handed 310
Helix 35
AD8
A
701 703Right-handed 310
Helix 36
AD9
A
725 729Right-handed 310
Helix 37
AE1
A
732 741Right-handed alpha
Helix 38
AE2
A
742 747Right-handed alpha
Helix 39
AE3
A
771 773Right-handed 310
Helix 40
AE4
A
774 779Right-handed alpha
Helix 41
AE5
A
779 788Right-handed alpha
Helix 42
AE6
A
790 801Right-handed alpha
Helix 43
AE7
A
828 849Right-handed alpha
Helix 44
AE8
A
869 878Right-handed alpha
Helix 45
AE9
A
879 884Right-handed alpha
Helix 46
AF1
A
887 900Right-handed alpha
Helix 47
AF2
A
908 917Right-handed alpha
Helix 48
AF3
A
948 951Right-handed 310
Helix 49
AF4
A
968 982Right-handed alpha
Helix 50
AF5
A
989 1024Right-handed alpha
Helix 51
AF6
A
1041 1047Right-handed 310
Helix 52
AF7
A
1049 1063Right-handed alpha
Helix 53
AF8
A
1064 1066Right-handed 310
Helix 54
AF9
A
1073 1077Right-handed 310
Helix 55
AG1
A
1078 1083Right-handed 310
Helix 56
AG2
A
1135 1137Right-handed 310
Helix 57
AG3
A
1138 1156Right-handed alpha
Helix 58
AG4
A
1157 1159Right-handed 310
Back to top of page

There are 9 sheets in PDB entry 9HLX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
568 573first strand
Strand 2
A
462 469anti-parallel
Strand 3
A
421 430anti-parallel
Strand 4
A
209 215parallel
Strand 5
A
633 639anti-parallel
Strand 6
A
663 672anti-parallel
Strand 7
A
629 630anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
568 573first strand
Strand 2
A
462 469anti-parallel
Strand 3
A
421 430anti-parallel
Strand 4
A
433 440anti-parallel
Strand 5
A
589 594anti-parallel
Strand 6
A
6 18anti-parallel
Strand 7
A
663 672anti-parallel
Strand 8
A
629 630anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 69first strand
Strand 2
A
170 171anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 277first strand
Strand 2
A
289 291parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
809 810first strand
Strand 2
A
721 724anti-parallel
Strand 3
A
705 711anti-parallel
Strand 4
A
1026 1032parallel
Strand 5
A
1095 1098parallel
Strand 6
A
1090 1092anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
748 753first strand
Strand 2
A
802 807anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
759 761first strand
Strand 2
A
767 769anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
816 818first strand
Strand 2
A
821 823anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
933 935first strand
Strand 2
A
953 955anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il