Analysis of interatomic Contacts of Structural Units in PDB entry:
9HMU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9HMU entry

There are 3 chains in PDB entry 9HMU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 27GLU 250
B
 ALA 28GLU 250
C
 ALA 28GLU 250
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 9HMU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
100 105Right-handed 310
Helix 2
AA2
A
113 117Right-handed 310
Helix 3
AA3
A
126 128Right-handed 310
Helix 4
AA4
A
151 161Right-handed alpha
Helix 5
AA5
A
201 205Right-handed 310
Helix 6
AA6
A
217 219Right-handed 310
Helix 7
AA7
B
100 105Right-handed 310
Helix 8
AA8
B
113 117Right-handed 310
Helix 9
AA9
B
126 128Right-handed 310
Helix 10
AB1
B
151 161Right-handed alpha
Helix 11
AB2
B
201 205Right-handed 310
Helix 12
AB3
B
217 219Right-handed 310
Helix 13
AB4
C
100 105Right-handed 310
Helix 14
AB5
C
113 117Right-handed 310
Helix 15
AB6
C
126 128Right-handed 310
Helix 16
AB7
C
151 161Right-handed alpha
Helix 17
AB8
C
201 205Right-handed 310
Helix 18
AB9
C
217 219Right-handed 310
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There are 6 sheets in PDB entry 9HMU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 42first strand
Strand 2
A
85 92anti-parallel
Strand 3
A
73 80anti-parallel
Strand 4
A
130 140anti-parallel
Strand 5
A
221 231anti-parallel
Strand 6
A
172 182anti-parallel
Strand 7
A
185 197anti-parallel
Strand 8
A
206 207anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 56first strand
Strand 2
A
59 70anti-parallel
Strand 3
A
73 80anti-parallel
Strand 4
A
85 92anti-parallel
Strand 5
A
120 124anti-parallel
Strand 6
A
239 247anti-parallel
Strand 7
A
145 149anti-parallel
Strand 8
A
212 215anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
41 42first strand
Strand 2
B
86 92anti-parallel
Strand 3
B
73 80anti-parallel
Strand 4
B
130 140anti-parallel
Strand 5
B
221 231anti-parallel
Strand 6
B
172 182anti-parallel
Strand 7
B
185 197anti-parallel
Strand 8
B
206 207anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 56first strand
Strand 2
B
59 70anti-parallel
Strand 3
B
73 80anti-parallel
Strand 4
B
86 92anti-parallel
Strand 5
B
120 124anti-parallel
Strand 6
B
239 247anti-parallel
Strand 7
B
145 149anti-parallel
Strand 8
B
212 215anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
41 42first strand
Strand 2
C
86 92anti-parallel
Strand 3
C
73 80anti-parallel
Strand 4
C
130 140anti-parallel
Strand 5
C
221 231anti-parallel
Strand 6
C
173 182anti-parallel
Strand 7
C
185 196anti-parallel
Strand 8
C
206 207anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
49 56first strand
Strand 2
C
59 70anti-parallel
Strand 3
C
73 80anti-parallel
Strand 4
C
86 92anti-parallel
Strand 5
C
120 124anti-parallel
Strand 6
C
239 247anti-parallel
Strand 7
C
145 149anti-parallel
Strand 8
C
212 215anti-parallel
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