Analysis of interatomic Contacts of Structural Units in PDB entry:
9HN9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9HN9 entry

There are 3 chains in PDB entry 9HN9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 12LEU 402
B
 PRO 31ASN 400
C
 C 1 A 91
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 9HN9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
48 56Right-handed alpha
Helix 2
AA2
A
58 65Right-handed alpha
Helix 3
AA3
A
74 80Right-handed alpha
Helix 4
AA4
A
82 90Right-handed alpha
Helix 5
AA5
A
90 96Right-handed alpha
Helix 6
AA6
A
131 135Right-handed 310
Helix 7
AA7
A
139 151Right-handed alpha
Helix 8
AA8
A
168 189Right-handed alpha
Helix 9
AA9
A
207 220Right-handed alpha
Helix 10
AB1
A
235 250Right-handed alpha
Helix 11
AB2
A
263 274Right-handed alpha
Helix 12
AB3
A
319 325Right-handed alpha
Helix 13
AB4
A
326 337Right-handed alpha
Helix 14
AB5
A
337 366Right-handed alpha
Helix 15
AB6
A
368 382Right-handed alpha
Helix 16
AB7
A
383 387Right-handed 310
Helix 17
AB8
A
388 399Right-handed alpha
Helix 18
AB9
B
46 53Right-handed alpha
Helix 19
AC1
B
68 76Right-handed alpha
Helix 20
AC2
B
81 86Right-handed alpha
Helix 21
AC3
B
125 137Right-handed alpha
Helix 22
AC4
B
147 151Right-handed 310
Helix 23
AC5
B
157 179Right-handed alpha
Helix 24
AC6
B
181 186Right-handed alpha
Helix 25
AC7
B
198 211Right-handed alpha
Helix 26
AC8
B
229 243Right-handed alpha
Helix 27
AC9
B
256 267Right-handed alpha
Helix 28
AD1
B
274 282Right-handed alpha
Helix 29
AD2
B
337 341Right-handed 310
Helix 30
AD3
B
353 359Right-handed alpha
Helix 31
AD4
B
360 371Right-handed alpha
Helix 32
AD5
B
373 400Right-handed alpha
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There are 8 sheets in PDB entry 9HN9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 19first strand
Strand 2
A
31 35anti-parallel
Strand 3
A
38 42anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 45first strand
Strand 2
A
277 278parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 73first strand
Strand 2
A
101 105parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 127first strand
Strand 2
A
136 138anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 156first strand
Strand 2
A
196 201parallel
Strand 3
A
224 227parallel
Strand 4
A
256 258parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
291 294first strand
Strand 2
A
297 300anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 37first strand
Strand 2
B
59 63parallel
Strand 3
B
91 95parallel
Strand 4
B
140 142parallel
Strand 5
B
188 193parallel
Strand 6
B
216 219parallel
Strand 7
B
249 251parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
284 286first strand
Strand 2
B
332 334anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il