Analysis of interatomic Contacts of Structural Units in PDB entry:
9HPQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9HPQ entry

There are 7 chains in PDB entry 9HPQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 144HIS 245
B
 SER 143HIS 243
C
 PHE 144LEU 239
D
 SER 143HIS 244
E
 GLY 4PRO 9
F
 PRO 1PRO 8
G
 GLY 3PRO 8
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 9HPQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
146 160Right-handed alpha
Helix 2
AA2
A
162 179Right-handed alpha
Helix 3
AA3
A
186 201Right-handed alpha
Helix 4
AA4
A
203 218Right-handed alpha
Helix 5
AA5
A
221 245Right-handed alpha
Helix 6
AA6
B
146 160Right-handed alpha
Helix 7
AA7
B
162 179Right-handed alpha
Helix 8
AA8
B
186 201Right-handed alpha
Helix 9
AA9
B
203 218Right-handed alpha
Helix 10
AB1
B
221 243Right-handed alpha
Helix 11
AB2
C
146 160Right-handed alpha
Helix 12
AB3
C
162 179Right-handed alpha
Helix 13
AB4
C
186 201Right-handed alpha
Helix 14
AB5
C
203 218Right-handed alpha
Helix 15
AB6
C
221 239Right-handed alpha
Helix 16
AB7
D
146 160Right-handed alpha
Helix 17
AB8
D
162 179Right-handed alpha
Helix 18
AB9
D
186 201Right-handed alpha
Helix 19
AC1
D
203 218Right-handed alpha
Helix 20
AC2
D
221 243Right-handed alpha
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There are no sheets in PDB entry 9HPQ
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il