Analysis of interatomic Contacts of Structural Units in PDB entry:
9HQU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9HQU entry

There are 4 chains in PDB entry 9HQU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 660
B
 MET 1VAL 660
C
 TRP 243ALA 403
D
 MET 1LEU 164
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 9HQU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 51Right-handed alpha
Helix 2
AA2
A
118 130Right-handed alpha
Helix 3
AA3
A
151 157Right-handed 310
Helix 4
AA4
A
177 192Right-handed alpha
Helix 5
AA5
A
196 245Right-handed alpha
Helix 6
AA6
A
255 269Right-handed alpha
Helix 7
AA7
A
282 331Right-handed alpha
Helix 8
AA8
A
333 336Right-handed 310
Helix 9
AA9
A
337 343Right-handed alpha
Helix 10
AB1
A
357 377Right-handed alpha
Helix 11
AB2
A
378 421Right-handed alpha
Helix 12
AB3
A
422 451Right-handed alpha
Helix 13
AB4
A
455 478Right-handed alpha
Helix 14
AB5
A
479 500Right-handed alpha
Helix 15
AB6
A
532 534Right-handed 310
Helix 16
AB7
A
536 557Right-handed alpha
Helix 17
AB8
A
572 576Right-handed 310
Helix 18
AB9
A
598 616Right-handed alpha
Helix 19
AC1
A
642 646Right-handed 310
Helix 20
AC2
A
653 660Right-handed alpha
Helix 21
AC3
B
42 51Right-handed alpha
Helix 22
AC4
B
117 129Right-handed alpha
Helix 23
AC5
B
151 155Right-handed 310
Helix 24
AC6
B
177 192Right-handed alpha
Helix 25
AC7
B
196 225Right-handed alpha
Helix 26
AC8
B
227 245Right-handed alpha
Helix 27
AC9
B
255 269Right-handed alpha
Helix 28
AD1
B
277 321Right-handed alpha
Helix 29
AD2
B
334 343Right-handed alpha
Helix 30
AD3
B
356 381Right-handed alpha
Helix 31
AD4
B
389 420Right-handed alpha
Helix 32
AD5
B
421 426Right-handed 310
Helix 33
AD6
B
433 449Right-handed alpha
Helix 34
AD7
B
455 476Right-handed alpha
Helix 35
AD8
B
477 500Right-handed alpha
Helix 36
AD9
B
532 534Right-handed 310
Helix 37
AE1
B
537 557Right-handed alpha
Helix 38
AE2
B
598 615Right-handed alpha
Helix 39
AE3
B
629 633Right-handed 310
Helix 40
AE4
B
647 652Right-handed 310
Helix 41
AE5
C
244 258Right-handed alpha
Helix 42
AE6
C
265 269Right-handed 310
Helix 43
AE7
C
275 285Right-handed alpha
Helix 44
AE8
C
287 311Right-handed alpha
Helix 45
AE9
C
317 341Right-handed alpha
Helix 46
AF1
C
345 360Right-handed alpha
Helix 47
AF2
C
373 384Right-handed alpha
Helix 48
AF3
C
392 403Right-handed alpha
Helix 49
AF4
D
3 10Right-handed alpha
Helix 50
AF5
D
11 30Right-handed alpha
Helix 51
AF6
D
38 43Right-handed 310
Helix 52
AF7
D
44 49Right-handed alpha
Helix 53
AF8
D
50 60Right-handed alpha
Helix 54
AF9
D
61 63Right-handed 310
Helix 55
AG1
D
64 74Right-handed alpha
Helix 56
AG2
D
80 94Right-handed alpha
Helix 57
AG3
D
94 108Right-handed alpha
Helix 58
AG4
D
133 150Right-handed alpha
Helix 59
AG5
D
152 161Right-handed alpha
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There are 7 sheets in PDB entry 9HQU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 23first strand
Strand 2
A
3 12anti-parallel
Strand 3
A
67 76anti-parallel
Strand 4
A
79 86anti-parallel
Strand 5
A
96 102anti-parallel
Strand 6
A
116 117anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 160first strand
Strand 2
A
566 570parallel
Strand 3
A
621 626parallel
Strand 4
A
29 33parallel
Strand 5
A
639 640parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
511 514first strand
Strand 2
A
519 523anti-parallel
Strand 3
A
528 530anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
20 23first strand
Strand 2
B
3 12anti-parallel
Strand 3
B
67 76anti-parallel
Strand 4
B
79 86anti-parallel
Strand 5
B
97 102anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
566 570first strand
Strand 2
B
621 625parallel
Strand 3
B
29 32parallel
Strand 4
B
639 640parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
511 514first strand
Strand 2
B
519 523anti-parallel
Strand 3
B
528 530anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
111 113first strand
Strand 2
D
119 121anti-parallel
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