Analysis of interatomic Contacts of Structural Units in PDB entry:
9HR5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9HR5 entry

There are 6 chains in PDB entry 9HR5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 13ALA 403
B
 SER 26ALA 403
C
 LYS 13ALA 403
D
 LYS 250ALA 403
G
 C 10 A 31
H
 T 15 G 36
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 9HR5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 38Right-handed alpha
Helix 2
AA2
A
80 95Right-handed alpha
Helix 3
AA3
A
116 125Right-handed alpha
Helix 4
AA4
A
127 143Right-handed alpha
Helix 5
AA5
A
149 153Right-handed 310
Helix 6
AA6
A
156 169Right-handed alpha
Helix 7
AA7
A
170 181Right-handed alpha
Helix 8
AA8
A
189 200Right-handed alpha
Helix 9
AA9
A
207 228Right-handed alpha
Helix 10
AB1
A
237 249Right-handed alpha
Helix 11
AB2
A
265 270Right-handed alpha
Helix 12
AB3
A
271 273Right-handed 310
Helix 13
AB4
A
275 282Right-handed alpha
Helix 14
AB5
A
290 311Right-handed alpha
Helix 15
AB6
A
315 341Right-handed alpha
Helix 16
AB7
A
345 359Right-handed alpha
Helix 17
AB8
A
363 367Right-handed 310
Helix 18
AB9
A
372 384Right-handed alpha
Helix 19
AC1
A
392 403Right-handed alpha
Helix 20
AC2
B
27 38Right-handed alpha
Helix 21
AC3
B
81 95Right-handed alpha
Helix 22
AC4
B
118 125Right-handed alpha
Helix 23
AC5
B
127 144Right-handed alpha
Helix 24
AC6
B
149 153Right-handed 310
Helix 25
AC7
B
157 168Right-handed alpha
Helix 26
AC8
B
170 180Right-handed alpha
Helix 27
AC9
B
191 200Right-handed alpha
Helix 28
AD1
B
207 229Right-handed alpha
Helix 29
AD2
B
237 252Right-handed alpha
Helix 30
AD3
B
265 270Right-handed alpha
Helix 31
AD4
B
271 273Right-handed 310
Helix 32
AD5
B
275 284Right-handed alpha
Helix 33
AD6
B
287 311Right-handed alpha
Helix 34
AD7
B
315 341Right-handed alpha
Helix 35
AD8
B
345 358Right-handed alpha
Helix 36
AD9
B
372 384Right-handed alpha
Helix 37
AE1
B
392 403Right-handed alpha
Helix 38
AE2
C
18 39Right-handed alpha
Helix 39
AE3
C
80 96Right-handed alpha
Helix 40
AE4
C
116 125Right-handed alpha
Helix 41
AE5
C
127 144Right-handed alpha
Helix 42
AE6
C
151 155Right-handed 310
Helix 43
AE7
C
156 168Right-handed alpha
Helix 44
AE8
C
170 180Right-handed alpha
Helix 45
AE9
C
189 201Right-handed alpha
Helix 46
AF1
C
207 228Right-handed alpha
Helix 47
AF2
C
237 252Right-handed alpha
Helix 48
AF3
C
265 270Right-handed alpha
Helix 49
AF4
C
271 273Right-handed 310
Helix 50
AF5
C
275 284Right-handed alpha
Helix 51
AF6
C
287 311Right-handed alpha
Helix 52
AF7
C
315 341Right-handed alpha
Helix 53
AF8
C
345 360Right-handed alpha
Helix 54
AF9
C
372 384Right-handed alpha
Helix 55
AG1
C
392 401Right-handed alpha
Helix 56
AG2
D
266 272Right-handed alpha
Helix 57
AG3
D
275 282Right-handed alpha
Helix 58
AG4
D
283 285Right-handed 310
Helix 59
AG5
D
287 312Right-handed alpha
Helix 60
AG6
D
315 341Right-handed alpha
Helix 61
AG7
D
345 359Right-handed alpha
Helix 62
AG8
D
372 384Right-handed alpha
Helix 63
AG9
D
392 403Right-handed alpha
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There are 4 sheets in PDB entry 9HR5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 56first strand
Strand 2
A
44 47anti-parallel
Strand 3
A
234 236anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 44first strand
Strand 2
B
235 236anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
106 107first strand
Strand 2
B
181 182parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
62 65first strand
Strand 2
C
53 56anti-parallel
Strand 3
C
44 47anti-parallel
Strand 4
C
234 236anti-parallel
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