Analysis of interatomic Contacts of Structural Units in PDB entry:
9HRB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9HRB entry

There are 4 chains in PDB entry 9HRB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 4GLY 154
A
 ALA 156CYS 413
B
 GLN 4GLY 154
B
 ALA 156CYS 413
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 9HRB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 34Right-handed alpha
Helix 2
AA2
A
38 49Right-handed alpha
Helix 3
AA3
A
74 102Right-handed alpha
Helix 4
AA4
A
104 108Right-handed 310
Helix 5
AA5
A
123 133Right-handed alpha
Helix 6
AA6
A
153 155Right-handed 310
Helix 7
AA7
A
156 175Right-handed alpha
Helix 8
AA8
A
189 191Right-handed 310
Helix 9
AA9
A
192 202Right-handed alpha
Helix 10
AB1
A
205 209Right-handed 310
Helix 11
AB2
A
211 215Right-handed 310
Helix 12
AB3
A
228 235Right-handed alpha
Helix 13
AB4
A
288 314Right-handed alpha
Helix 14
AB5
A
328 330Right-handed 310
Helix 15
AB6
A
340 352Right-handed alpha
Helix 16
AB7
A
354 357Right-handed 310
Helix 17
AB8
A
358 369Right-handed alpha
Helix 18
AB9
A
374 384Right-handed alpha
Helix 19
AC1
A
385 389Right-handed 310
Helix 20
AC2
B
22 34Right-handed alpha
Helix 21
AC3
B
38 49Right-handed alpha
Helix 22
AC4
B
74 101Right-handed alpha
Helix 23
AC5
B
104 108Right-handed 310
Helix 24
AC6
B
123 132Right-handed alpha
Helix 25
AC7
B
153 155Right-handed 310
Helix 26
AC8
B
156 175Right-handed alpha
Helix 27
AC9
B
189 191Right-handed 310
Helix 28
AD1
B
192 203Right-handed alpha
Helix 29
AD2
B
205 209Right-handed 310
Helix 30
AD3
B
211 215Right-handed 310
Helix 31
AD4
B
228 235Right-handed alpha
Helix 32
AD5
B
288 313Right-handed alpha
Helix 33
AD6
B
328 330Right-handed 310
Helix 34
AD7
B
340 352Right-handed alpha
Helix 35
AD8
B
354 357Right-handed 310
Helix 36
AD9
B
358 369Right-handed alpha
Helix 37
AE1
B
374 383Right-handed alpha
Helix 38
AE2
B
384 389Right-handed 310
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There are 6 sheets in PDB entry 9HRB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 150first strand
Strand 2
A
110 114parallel
Strand 3
A
180 187parallel
Strand 4
A
219 227anti-parallel
Strand 5
A
7 15anti-parallel
Strand 6
A
255 264anti-parallel
Strand 7
A
404 412anti-parallel
Strand 8
A
393 400anti-parallel
Strand 9
A
332 336parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 21first strand
Strand 2
A
56 58anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
272 277first strand
Strand 2
A
280 285anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
146 150first strand
Strand 2
B
110 114parallel
Strand 3
B
180 187parallel
Strand 4
B
219 227anti-parallel
Strand 5
B
7 15anti-parallel
Strand 6
B
255 264anti-parallel
Strand 7
B
404 412anti-parallel
Strand 8
B
393 400anti-parallel
Strand 9
B
332 336parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 21first strand
Strand 2
B
56 58anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
272 277first strand
Strand 2
B
280 285anti-parallel
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