Analysis of interatomic Contacts of Structural Units in PDB entry:
9HS1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9HS1 entry

There are 4 chains in PDB entry 9HS1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 0	CYS 453
B	ALA 1	THR 454
C	ARG 0	ILE 452
D	PRO -3	CYS 453

There are 90 helices in PDB entry 9HS1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	27	Right-handed alpha
Helix 2	AA2	A	30	43	Right-handed alpha
Helix 3	AA3	A	50	55	Right-handed alpha
Helix 4	AA4	A	80	82	Right-handed 310
Helix 5	AA5	A	90	105	Right-handed alpha
Helix 6	AA6	A	105	111	Right-handed alpha
Helix 7	AA7	A	123	139	Right-handed alpha
Helix 8	AA8	A	160	177	Right-handed alpha
Helix 9	AA9	A	187	190	Right-handed 310
Helix 10	AB1	A	191	204	Right-handed alpha
Helix 11	AB2	A	216	223	Right-handed alpha
Helix 12	AB3	A	237	249	Right-handed alpha
Helix 13	AB4	A	259	273	Right-handed alpha
Helix 14	AB5	A	274	278	Right-handed 310
Helix 15	AB6	A	289	291	Right-handed 310
Helix 16	AB7	A	292	308	Right-handed alpha
Helix 17	AB8	A	309	314	Right-handed 310
Helix 18	AB9	A	321	344	Right-handed alpha
Helix 19	AC1	A	356	361	Right-handed 310
Helix 20	AC2	A	366	372	Right-handed alpha
Helix 21	AC3	A	380	401	Right-handed alpha
Helix 22	AC4	A	401	412	Right-handed alpha
Helix 23	AC5	A	419	436	Right-handed alpha
Helix 24	AC6	B	15	27	Right-handed alpha
Helix 25	AC7	B	30	43	Right-handed alpha
Helix 26	AC8	B	50	56	Right-handed alpha
Helix 27	AC9	B	80	82	Right-handed 310
Helix 28	AD1	B	90	105	Right-handed alpha
Helix 29	AD2	B	107	111	Right-handed 310
Helix 30	AD3	B	124	139	Right-handed alpha
Helix 31	AD4	B	160	177	Right-handed alpha
Helix 32	AD5	B	187	190	Right-handed 310
Helix 33	AD6	B	191	204	Right-handed alpha
Helix 34	AD7	B	216	221	Right-handed alpha
Helix 35	AD8	B	237	249	Right-handed alpha
Helix 36	AD9	B	259	273	Right-handed alpha
Helix 37	AE1	B	274	278	Right-handed 310
Helix 38	AE2	B	289	291	Right-handed 310
Helix 39	AE3	B	292	308	Right-handed alpha
Helix 40	AE4	B	309	314	Right-handed 310
Helix 41	AE5	B	321	344	Right-handed alpha
Helix 42	AE6	B	356	361	Right-handed alpha
Helix 43	AE7	B	366	373	Right-handed alpha
Helix 44	AE8	B	380	401	Right-handed alpha
Helix 45	AE9	B	401	412	Right-handed alpha
Helix 46	AF1	B	419	436	Right-handed alpha
Helix 47	AF2	C	15	27	Right-handed alpha
Helix 48	AF3	C	30	43	Right-handed alpha
Helix 49	AF4	C	50	55	Right-handed alpha
Helix 50	AF5	C	80	82	Right-handed 310
Helix 51	AF6	C	90	105	Right-handed alpha
Helix 52	AF7	C	107	112	Right-handed alpha
Helix 53	AF8	C	124	139	Right-handed alpha
Helix 54	AF9	C	160	176	Right-handed alpha
Helix 55	AG1	C	187	190	Right-handed 310
Helix 56	AG2	C	191	204	Right-handed alpha
Helix 57	AG3	C	216	221	Right-handed alpha
Helix 58	AG4	C	237	249	Right-handed alpha
Helix 59	AG5	C	259	273	Right-handed alpha
Helix 60	AG6	C	274	278	Right-handed 310
Helix 61	AG7	C	289	291	Right-handed 310
Helix 62	AG8	C	292	308	Right-handed alpha
Helix 63	AG9	C	309	315	Right-handed 310
Helix 64	AH1	C	321	344	Right-handed alpha
Helix 65	AH2	C	356	361	Right-handed 310
Helix 66	AH3	C	366	372	Right-handed alpha
Helix 67	AH4	C	380	401	Right-handed alpha
Helix 68	AH5	C	401	412	Right-handed alpha
Helix 69	AH6	C	419	436	Right-handed alpha
Helix 70	AH7	D	15	28	Right-handed alpha
Helix 71	AH8	D	30	43	Right-handed alpha
Helix 72	AH9	D	80	82	Right-handed 310
Helix 73	AI1	D	90	109	Right-handed alpha
Helix 74	AI2	D	124	139	Right-handed alpha
Helix 75	AI3	D	160	176	Right-handed alpha
Helix 76	AI4	D	187	190	Right-handed 310
Helix 77	AI5	D	191	204	Right-handed alpha
Helix 78	AI6	D	216	221	Right-handed alpha
Helix 79	AI7	D	237	249	Right-handed alpha
Helix 80	AI8	D	258	273	Right-handed alpha
Helix 81	AI9	D	274	278	Right-handed 310
Helix 82	AJ1	D	289	291	Right-handed 310
Helix 83	AJ2	D	292	308	Right-handed alpha
Helix 84	AJ3	D	309	314	Right-handed 310
Helix 85	AJ4	D	321	343	Right-handed alpha
Helix 86	AJ5	D	356	361	Right-handed alpha
Helix 87	AJ6	D	366	371	Right-handed alpha
Helix 88	AJ7	D	380	401	Right-handed alpha
Helix 89	AJ8	D	401	412	Right-handed alpha
Helix 90	AJ9	D	419	436	Right-handed alpha

There are 16 sheets in PDB entry 9HS1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2	5	first strand
Strand 2	A	71	77	anti-parallel
Strand 3	A	62	68	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	88	89	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	231	234	first strand
Strand 2	A	211	215	parallel
Strand 3	A	180	183	parallel
Strand 4	A	150	154	parallel
Strand 5	A	251	254	parallel
Strand 6	A	284	288	parallel
Strand 7	A	316	319	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	414	416	first strand
Strand 2	A	450	452	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2	5	first strand
Strand 2	B	71	77	anti-parallel
Strand 3	B	62	68	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	85	first strand
Strand 2	B	88	89	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	231	234	first strand
Strand 2	B	211	215	parallel
Strand 3	B	180	183	parallel
Strand 4	B	150	154	parallel
Strand 5	B	251	254	parallel
Strand 6	B	284	288	parallel
Strand 7	B	316	319	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	414	416	first strand
Strand 2	B	450	452	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2	5	first strand
Strand 2	C	71	77	anti-parallel
Strand 3	C	62	68	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	85	first strand
Strand 2	C	88	89	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	231	234	first strand
Strand 2	C	211	215	parallel
Strand 3	C	180	183	parallel
Strand 4	C	150	154	parallel
Strand 5	C	251	254	parallel
Strand 6	C	284	288	parallel
Strand 7	C	316	319	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	374	375	first strand
Strand 2	C	417	418	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2	5	first strand
Strand 2	D	72	77	anti-parallel
Strand 3	D	62	67	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	84	85	first strand
Strand 2	D	88	89	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	231	234	first strand
Strand 2	D	211	215	parallel
Strand 3	D	180	183	parallel
Strand 4	D	150	154	parallel
Strand 5	D	251	254	parallel
Strand 6	D	284	288	parallel
Strand 7	D	316	319	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	414	417	first strand
Strand 2	D	450	453	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9HS1

Analysis of interatomic Contacts of Structural Units in PDB entry:
9HS1