Analysis of interatomic Contacts of Structural Units in PDB entry:
9HS3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9HS3 entry

There are 4 chains in PDB entry 9HS3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 0	TYR 450
B	MET 0	CYS 453
C	MET 0	CYS 453
D	PRO -3	CYS 453

There are 87 helices in PDB entry 9HS3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	28	Right-handed alpha
Helix 2	AA2	A	30	42	Right-handed alpha
Helix 3	AA3	A	80	82	Right-handed 310
Helix 4	AA4	A	90	106	Right-handed alpha
Helix 5	AA5	A	106	113	Right-handed alpha
Helix 6	AA6	A	124	139	Right-handed alpha
Helix 7	AA7	A	160	177	Right-handed alpha
Helix 8	AA8	A	187	190	Right-handed 310
Helix 9	AA9	A	191	204	Right-handed alpha
Helix 10	AB1	A	216	223	Right-handed alpha
Helix 11	AB2	A	237	249	Right-handed alpha
Helix 12	AB3	A	260	274	Right-handed alpha
Helix 13	AB4	A	275	278	Right-handed 310
Helix 14	AB5	A	292	307	Right-handed alpha
Helix 15	AB6	A	308	312	Right-handed 310
Helix 16	AB7	A	321	344	Right-handed alpha
Helix 17	AB8	A	356	361	Right-handed alpha
Helix 18	AB9	A	366	372	Right-handed alpha
Helix 19	AC1	A	380	400	Right-handed alpha
Helix 20	AC2	A	401	408	Right-handed alpha
Helix 21	AC3	A	419	436	Right-handed alpha
Helix 22	AC4	B	15	28	Right-handed alpha
Helix 23	AC5	B	30	42	Right-handed alpha
Helix 24	AC6	B	80	82	Right-handed 310
Helix 25	AC7	B	90	105	Right-handed alpha
Helix 26	AC8	B	106	111	Right-handed alpha
Helix 27	AC9	B	124	139	Right-handed alpha
Helix 28	AD1	B	160	177	Right-handed alpha
Helix 29	AD2	B	187	190	Right-handed 310
Helix 30	AD3	B	191	204	Right-handed alpha
Helix 31	AD4	B	216	223	Right-handed alpha
Helix 32	AD5	B	237	249	Right-handed alpha
Helix 33	AD6	B	258	274	Right-handed alpha
Helix 34	AD7	B	275	278	Right-handed 310
Helix 35	AD8	B	291	308	Right-handed alpha
Helix 36	AD9	B	309	312	Right-handed 310
Helix 37	AE1	B	321	344	Right-handed alpha
Helix 38	AE2	B	356	361	Right-handed alpha
Helix 39	AE3	B	366	372	Right-handed alpha
Helix 40	AE4	B	380	398	Right-handed alpha
Helix 41	AE5	B	401	412	Right-handed alpha
Helix 42	AE6	B	421	436	Right-handed alpha
Helix 43	AE7	C	15	28	Right-handed alpha
Helix 44	AE8	C	30	42	Right-handed alpha
Helix 45	AE9	C	52	57	Right-handed alpha
Helix 46	AF1	C	80	82	Right-handed 310
Helix 47	AF2	C	90	104	Right-handed alpha
Helix 48	AF3	C	106	111	Right-handed alpha
Helix 49	AF4	C	124	139	Right-handed alpha
Helix 50	AF5	C	160	177	Right-handed alpha
Helix 51	AF6	C	187	190	Right-handed 310
Helix 52	AF7	C	191	204	Right-handed alpha
Helix 53	AF8	C	216	221	Right-handed alpha
Helix 54	AF9	C	237	249	Right-handed alpha
Helix 55	AG1	C	258	274	Right-handed alpha
Helix 56	AG2	C	275	278	Right-handed 310
Helix 57	AG3	C	292	307	Right-handed alpha
Helix 58	AG4	C	308	314	Right-handed 310
Helix 59	AG5	C	321	344	Right-handed alpha
Helix 60	AG6	C	356	361	Right-handed alpha
Helix 61	AG7	C	367	372	Right-handed alpha
Helix 62	AG8	C	380	401	Right-handed alpha
Helix 63	AG9	C	401	411	Right-handed alpha
Helix 64	AH1	C	419	436	Right-handed alpha
Helix 65	AH2	D	15	28	Right-handed alpha
Helix 66	AH3	D	30	43	Right-handed alpha
Helix 67	AH4	D	53	57	Right-handed 310
Helix 68	AH5	D	80	82	Right-handed 310
Helix 69	AH6	D	90	106	Right-handed alpha
Helix 70	AH7	D	106	113	Right-handed alpha
Helix 71	AH8	D	124	139	Right-handed alpha
Helix 72	AH9	D	160	177	Right-handed alpha
Helix 73	AI1	D	187	190	Right-handed 310
Helix 74	AI2	D	191	204	Right-handed alpha
Helix 75	AI3	D	216	223	Right-handed alpha
Helix 76	AI4	D	237	249	Right-handed alpha
Helix 77	AI5	D	258	274	Right-handed alpha
Helix 78	AI6	D	275	278	Right-handed 310
Helix 79	AI7	D	291	308	Right-handed alpha
Helix 80	AI8	D	309	314	Right-handed 310
Helix 81	AI9	D	321	344	Right-handed alpha
Helix 82	AJ1	D	356	361	Right-handed alpha
Helix 83	AJ2	D	366	372	Right-handed alpha
Helix 84	AJ3	D	380	400	Right-handed alpha
Helix 85	AJ4	D	401	406	Right-handed alpha
Helix 86	AJ5	D	406	412	Right-handed alpha
Helix 87	AJ6	D	419	436	Right-handed alpha

There are 14 sheets in PDB entry 9HS3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2	5	first strand
Strand 2	A	72	77	anti-parallel
Strand 3	A	62	67	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	88	89	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	231	234	first strand
Strand 2	A	211	215	parallel
Strand 3	A	180	183	parallel
Strand 4	A	150	154	parallel
Strand 5	A	252	254	parallel
Strand 6	A	284	288	parallel
Strand 7	A	316	319	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2	5	first strand
Strand 2	B	72	77	anti-parallel
Strand 3	B	62	67	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	85	first strand
Strand 2	B	88	89	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	231	234	first strand
Strand 2	B	211	215	parallel
Strand 3	B	180	183	parallel
Strand 4	B	150	154	parallel
Strand 5	B	252	254	parallel
Strand 6	B	284	288	parallel
Strand 7	B	315	319	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	414	416	first strand
Strand 2	B	450	452	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2	5	first strand
Strand 2	C	72	77	anti-parallel
Strand 3	C	62	67	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	85	first strand
Strand 2	C	88	89	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	231	234	first strand
Strand 2	C	211	215	parallel
Strand 3	C	180	183	parallel
Strand 4	C	150	154	parallel
Strand 5	C	251	254	parallel
Strand 6	C	284	288	parallel
Strand 7	C	316	319	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	414	416	first strand
Strand 2	C	450	452	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2	5	first strand
Strand 2	D	72	77	anti-parallel
Strand 3	D	62	67	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	84	85	first strand
Strand 2	D	88	89	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	232	234	first strand
Strand 2	D	211	215	parallel
Strand 3	D	180	183	parallel
Strand 4	D	150	154	parallel
Strand 5	D	252	254	parallel
Strand 6	D	284	288	parallel
Strand 7	D	317	319	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9HS3

Analysis of interatomic Contacts of Structural Units in PDB entry:
9HS3