Analysis of interatomic Contacts of Structural Units in PDB entry:
9HT5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9HT5 entry

There are 3 chains in PDB entry 9HT5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 1SER 346
B
 ILE 3SER 346
C
 ILE 3SER 346
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 9HT5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 26Right-handed 310
Helix 2
AA2
A
27 33Right-handed alpha
Helix 3
AA3
A
48 54Right-handed alpha
Helix 4
AA4
A
54 65Right-handed alpha
Helix 5
AA5
A
66 71Right-handed 310
Helix 6
AA6
A
83 91Right-handed 310
Helix 7
AA7
A
109 117Right-handed alpha
Helix 8
AA8
A
129 145Right-handed alpha
Helix 9
AA9
A
147 170Right-handed alpha
Helix 10
AB1
A
171 172Right-handed 310
Helix 11
AB2
A
173 177Right-handed 310
Helix 12
AB3
A
200 208Right-handed alpha
Helix 13
AB4
A
214 218Right-handed 310
Helix 14
AB5
A
226 234Right-handed alpha
Helix 15
AB6
A
260 273Right-handed alpha
Helix 16
AB7
A
276 279Right-handed 310
Helix 17
AB8
A
280 285Right-handed alpha
Helix 18
AB9
A
294 300Right-handed 310
Helix 19
AC1
A
301 313Right-handed alpha
Helix 20
AC2
A
321 334Right-handed alpha
Helix 21
AC3
B
24 26Right-handed 310
Helix 22
AC4
B
27 33Right-handed alpha
Helix 23
AC5
B
48 54Right-handed alpha
Helix 24
AC6
B
54 65Right-handed alpha
Helix 25
AC7
B
66 71Right-handed 310
Helix 26
AC8
B
83 91Right-handed 310
Helix 27
AC9
B
103 106Right-handed 310
Helix 28
AD1
B
107 117Right-handed alpha
Helix 29
AD2
B
129 145Right-handed alpha
Helix 30
AD3
B
147 170Right-handed alpha
Helix 31
AD4
B
171 172Right-handed 310
Helix 32
AD5
B
173 177Right-handed 310
Helix 33
AD6
B
201 208Right-handed alpha
Helix 34
AD7
B
226 234Right-handed alpha
Helix 35
AD8
B
260 273Right-handed alpha
Helix 36
AD9
B
276 279Right-handed 310
Helix 37
AE1
B
280 285Right-handed alpha
Helix 38
AE2
B
294 300Right-handed 310
Helix 39
AE3
B
301 313Right-handed alpha
Helix 40
AE4
B
321 334Right-handed alpha
Helix 41
AE5
C
24 26Right-handed 310
Helix 42
AE6
C
27 36Right-handed alpha
Helix 43
AE7
C
48 54Right-handed alpha
Helix 44
AE8
C
54 65Right-handed alpha
Helix 45
AE9
C
66 71Right-handed 310
Helix 46
AF1
C
110 117Right-handed alpha
Helix 47
AF2
C
129 145Right-handed alpha
Helix 48
AF3
C
147 170Right-handed alpha
Helix 49
AF4
C
171 172Right-handed 310
Helix 50
AF5
C
173 177Right-handed 310
Helix 51
AF6
C
201 208Right-handed alpha
Helix 52
AF7
C
226 234Right-handed alpha
Helix 53
AF8
C
260 273Right-handed alpha
Helix 54
AF9
C
276 279Right-handed 310
Helix 55
AG1
C
280 286Right-handed alpha
Helix 56
AG2
C
294 300Right-handed 310
Helix 57
AG3
C
301 313Right-handed alpha
Helix 58
AG4
C
321 334Right-handed alpha
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There are 10 sheets in PDB entry 9HT5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 4first strand
Strand 2
A
10 12anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 46first strand
Strand 2
A
20 22parallel
Strand 3
A
94 98parallel
Strand 4
A
121 124parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 212first strand
Strand 2
A
179 183parallel
Strand 3
A
237 242parallel
Strand 4
A
288 292parallel
Strand 5
A
343 345anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 196first strand
Strand 2
A
222 224anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 46first strand
Strand 2
B
20 22parallel
Strand 3
B
94 98parallel
Strand 4
B
121 124parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
211 212first strand
Strand 2
B
179 183parallel
Strand 3
B
237 242parallel
Strand 4
B
288 292parallel
Strand 5
B
343 345anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
194 196first strand
Strand 2
B
222 224anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
43 46first strand
Strand 2
C
20 22parallel
Strand 3
C
94 98parallel
Strand 4
C
121 124parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
211 212first strand
Strand 2
C
179 183parallel
Strand 3
C
237 242parallel
Strand 4
C
288 292parallel
Strand 5
C
343 345anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
194 196first strand
Strand 2
C
222 224anti-parallel
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