Analysis of interatomic Contacts of Structural Units in PDB entry:
9HV4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9HV4 entry

There is 1 chain in PDB entry 9HV4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 463SER 1588
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 9HV4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
463 472Right-handed alpha
Helix 2
AA2
A
477 488Right-handed alpha
Helix 3
AA3
A
489 495Right-handed alpha
Helix 4
AA4
A
497 510Right-handed alpha
Helix 5
AA5
A
541 551Right-handed alpha
Helix 6
AA6
A
590 610Right-handed alpha
Helix 7
AA7
A
616 618Right-handed 310
Helix 8
AA8
A
619 625Right-handed alpha
Helix 9
AA9
A
628 645Right-handed alpha
Helix 10
AB1
A
650 660Right-handed alpha
Helix 11
AB2
A
661 676Right-handed alpha
Helix 12
AB3
A
677 682Right-handed alpha
Helix 13
AB4
A
688 701Right-handed alpha
Helix 14
AB5
A
704 720Right-handed alpha
Helix 15
AB6
A
791 807Right-handed alpha
Helix 16
AB7
A
840 856Right-handed alpha
Helix 17
AB8
A
894 906Right-handed alpha
Helix 18
AB9
A
909 913Right-handed 310
Helix 19
AC1
A
922 927Right-handed alpha
Helix 20
AC2
A
927 945Right-handed alpha
Helix 21
AC3
A
963 970Right-handed alpha
Helix 22
AC4
A
995 1008Right-handed alpha
Helix 23
AC5
A
1012 1016Right-handed 310
Helix 24
AC6
A
1038 1046Right-handed alpha
Helix 25
AC7
A
1055 1065Right-handed alpha
Helix 26
AC8
A
1086 1091Right-handed alpha
Helix 27
AC9
A
1119 1129Right-handed alpha
Helix 28
AD1
A
1135 1140Right-handed alpha
Helix 29
AD2
A
1140 1163Right-handed alpha
Helix 30
AD3
A
1167 1178Right-handed alpha
Helix 31
AD4
A
1178 1203Right-handed alpha
Helix 32
AD5
A
1207 1223Right-handed alpha
Helix 33
AD6
A
1233 1244Right-handed alpha
Helix 34
AD7
A
1248 1269Right-handed alpha
Helix 35
AD8
A
1275 1280Right-handed alpha
Helix 36
AD9
A
1281 1286Right-handed 310
Helix 37
AE1
A
1287 1294Right-handed alpha
Helix 38
AE2
A
1295 1300Right-handed alpha
Helix 39
AE3
A
1303 1320Right-handed alpha
Helix 40
AE4
A
1323 1332Right-handed alpha
Helix 41
AE5
A
1335 1351Right-handed alpha
Helix 42
AE6
A
1351 1366Right-handed alpha
Helix 43
AE7
A
1368 1393Right-handed alpha
Helix 44
AE8
A
1399 1415Right-handed alpha
Helix 45
AE9
A
1417 1421Right-handed 310
Helix 46
AF1
A
1424 1439Right-handed alpha
Helix 47
AF2
A
1443 1452Right-handed alpha
Helix 48
AF3
A
1452 1469Right-handed alpha
Helix 49
AF4
A
1472 1488Right-handed alpha
Helix 50
AF5
A
1488 1498Right-handed alpha
Helix 51
AF6
A
1503 1530Right-handed alpha
Helix 52
AF7
A
1537 1548Right-handed alpha
Helix 53
AF8
A
1550 1567Right-handed alpha
Helix 54
AF9
A
1570 1583Right-handed alpha
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There are 6 sheets in PDB entry 9HV4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
516 522first strand
Strand 2
A
529 536anti-parallel
Strand 3
A
571 581anti-parallel
Strand 4
A
554 565anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
721 724first strand
Strand 2
A
740 744anti-parallel
Strand 3
A
759 764anti-parallel
Strand 4
A
768 774anti-parallel
Strand 5
A
813 821anti-parallel
Strand 6
A
779 785parallel
Strand 7
A
884 886parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
859 861first strand
Strand 2
A
866 868anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1026 1029first strand
Strand 2
A
986 989anti-parallel
Strand 3
A
976 982anti-parallel
Strand 4
A
953 958parallel
Strand 5
A
1070 1073parallel
Strand 6
A
1109 1112parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1035 1036first strand
Strand 2
A
1053 1054anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1080 1081first strand
Strand 2
A
1100 1101parallel
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