Analysis of interatomic Contacts of Structural Units in PDB entry:
9HWI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9HWI entry

There are 4 chains in PDB entry 9HWI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1TYR 346
B
 LEU 2TYR 346
C
 SER 1TYR 346
D
 SER 1TYR 346
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 69 helices in PDB entry 9HWI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 18Right-handed 310
Helix 2
AA2
A
37 44Right-handed alpha
Helix 3
AA3
A
45 51Right-handed alpha
Helix 4
AA4
A
53 66Right-handed alpha
Helix 5
AA5
A
85 90Right-handed alpha
Helix 6
AA6
A
91 93Right-handed 310
Helix 7
AA7
A
136 142Right-handed alpha
Helix 8
AA8
A
148 153Right-handed 310
Helix 9
AA9
A
181 198Right-handed alpha
Helix 10
AB1
A
200 202Right-handed 310
Helix 11
AB2
A
210 223Right-handed alpha
Helix 12
AB3
A
236 242Right-handed alpha
Helix 13
AB4
A
256 267Right-handed alpha
Helix 14
AB5
A
286 294Right-handed alpha
Helix 15
AB6
A
313 315Right-handed 310
Helix 16
AB7
A
316 321Right-handed alpha
Helix 17
AB8
A
321 334Right-handed alpha
Helix 18
AB9
B
14 18Right-handed 310
Helix 19
AC1
B
37 44Right-handed alpha
Helix 20
AC2
B
45 50Right-handed alpha
Helix 21
AC3
B
53 66Right-handed alpha
Helix 22
AC4
B
85 90Right-handed alpha
Helix 23
AC5
B
91 93Right-handed 310
Helix 24
AC6
B
136 142Right-handed alpha
Helix 25
AC7
B
148 153Right-handed 310
Helix 26
AC8
B
181 198Right-handed alpha
Helix 27
AC9
B
200 202Right-handed 310
Helix 28
AD1
B
210 223Right-handed alpha
Helix 29
AD2
B
236 242Right-handed alpha
Helix 30
AD3
B
256 267Right-handed alpha
Helix 31
AD4
B
286 294Right-handed alpha
Helix 32
AD5
B
313 315Right-handed 310
Helix 33
AD6
B
316 321Right-handed alpha
Helix 34
AD7
B
321 335Right-handed alpha
Helix 35
AD8
C
14 18Right-handed 310
Helix 36
AD9
C
37 44Right-handed alpha
Helix 37
AE1
C
45 53Right-handed alpha
Helix 38
AE2
C
53 66Right-handed alpha
Helix 39
AE3
C
85 90Right-handed alpha
Helix 40
AE4
C
91 93Right-handed 310
Helix 41
AE5
C
136 142Right-handed alpha
Helix 42
AE6
C
148 153Right-handed 310
Helix 43
AE7
C
181 198Right-handed alpha
Helix 44
AE8
C
200 202Right-handed 310
Helix 45
AE9
C
210 224Right-handed alpha
Helix 46
AF1
C
236 242Right-handed alpha
Helix 47
AF2
C
256 267Right-handed alpha
Helix 48
AF3
C
286 294Right-handed alpha
Helix 49
AF4
C
313 315Right-handed 310
Helix 50
AF5
C
316 321Right-handed alpha
Helix 51
AF6
C
321 335Right-handed alpha
Helix 52
AF7
D
14 18Right-handed 310
Helix 53
AF8
D
37 44Right-handed alpha
Helix 54
AF9
D
45 51Right-handed alpha
Helix 55
AG1
D
53 66Right-handed alpha
Helix 56
AG2
D
85 90Right-handed alpha
Helix 57
AG3
D
91 93Right-handed 310
Helix 58
AG4
D
136 142Right-handed alpha
Helix 59
AG5
D
148 153Right-handed 310
Helix 60
AG6
D
181 198Right-handed alpha
Helix 61
AG7
D
200 202Right-handed 310
Helix 62
AG8
D
210 224Right-handed alpha
Helix 63
AG9
D
236 242Right-handed alpha
Helix 64
AH1
D
256 267Right-handed alpha
Helix 65
AH2
D
286 294Right-handed alpha
Helix 66
AH3
D
295 298Right-handed 310
Helix 67
AH4
D
313 315Right-handed 310
Helix 68
AH5
D
316 321Right-handed alpha
Helix 69
AH6
D
321 335Right-handed alpha
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There are 8 sheets in PDB entry 9HWI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 8first strand
Strand 2
A
26 30parallel
Strand 3
A
77 82anti-parallel
Strand 4
A
68 74anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 101first strand
Strand 2
A
104 109anti-parallel
Strand 3
A
157 162anti-parallel
Strand 4
A
120 125parallel
Strand 5
A
204 209parallel
Strand 6
A
226 230parallel
Strand 7
A
276 280parallel
Strand 8
A
302 306parallel
Strand 9
A
342 344parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 8first strand
Strand 2
B
26 30parallel
Strand 3
B
77 82anti-parallel
Strand 4
B
68 74anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
99 101first strand
Strand 2
B
104 109anti-parallel
Strand 3
B
157 162anti-parallel
Strand 4
B
120 125parallel
Strand 5
B
204 209parallel
Strand 6
B
226 230parallel
Strand 7
B
276 280parallel
Strand 8
B
302 306parallel
Strand 9
B
341 344parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
4 8first strand
Strand 2
C
26 30parallel
Strand 3
C
77 82anti-parallel
Strand 4
C
68 74anti-parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
99 101first strand
Strand 2
C
104 109anti-parallel
Strand 3
C
157 162anti-parallel
Strand 4
C
120 125parallel
Strand 5
C
204 209parallel
Strand 6
C
226 230parallel
Strand 7
C
276 280parallel
Strand 8
C
302 306parallel
Strand 9
C
342 344parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4 8first strand
Strand 2
D
26 30parallel
Strand 3
D
77 82anti-parallel
Strand 4
D
68 74anti-parallel
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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
99 101first strand
Strand 2
D
104 109anti-parallel
Strand 3
D
157 162anti-parallel
Strand 4
D
120 125parallel
Strand 5
D
204 209parallel
Strand 6
D
226 230parallel
Strand 7
D
276 280parallel
Strand 8
D
302 306parallel
Strand 9
D
341 344parallel
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