Analysis of interatomic Contacts of Structural Units in PDB entry:
9HXL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9HXL entry

There are 2 chains in PDB entry 9HXL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 5LEU 534
B
 THR 5LEU 534
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 9HXL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 21Right-handed alpha
Helix 2
AA2
A
25 29Right-handed 310
Helix 3
AA3
A
34 51Right-handed alpha
Helix 4
AA4
A
55 66Right-handed alpha
Helix 5
AA5
A
66 74Right-handed alpha
Helix 6
AA6
A
75 78Right-handed 310
Helix 7
AA7
A
79 92Right-handed alpha
Helix 8
AA8
A
98 113Right-handed alpha
Helix 9
AA9
A
114 126Right-handed alpha
Helix 10
AB1
A
129 144Right-handed alpha
Helix 11
AB2
A
147 159Right-handed alpha
Helix 12
AB3
A
164 179Right-handed alpha
Helix 13
AB4
A
207 219Right-handed alpha
Helix 14
AB5
A
239 263Right-handed alpha
Helix 15
AB6
A
292 302Right-handed alpha
Helix 16
AB7
A
310 323Right-handed alpha
Helix 17
AB8
A
324 327Right-handed 310
Helix 18
AB9
A
329 346Right-handed alpha
Helix 19
AC1
A
350 357Right-handed alpha
Helix 20
AC2
A
359 370Right-handed alpha
Helix 21
AC3
A
372 382Right-handed alpha
Helix 22
AC4
A
426 442Right-handed alpha
Helix 23
AC5
A
442 471Right-handed alpha
Helix 24
AC6
A
478 491Right-handed alpha
Helix 25
AC7
A
493 505Right-handed alpha
Helix 26
AC8
A
507 521Right-handed alpha
Helix 27
AC9
A
525 534Right-handed alpha
Helix 28
AD1
B
7 21Right-handed alpha
Helix 29
AD2
B
25 29Right-handed 310
Helix 30
AD3
B
34 51Right-handed alpha
Helix 31
AD4
B
55 66Right-handed alpha
Helix 32
AD5
B
66 74Right-handed alpha
Helix 33
AD6
B
75 78Right-handed 310
Helix 34
AD7
B
79 92Right-handed alpha
Helix 35
AD8
B
98 113Right-handed alpha
Helix 36
AD9
B
114 126Right-handed alpha
Helix 37
AE1
B
129 144Right-handed alpha
Helix 38
AE2
B
147 159Right-handed alpha
Helix 39
AE3
B
164 179Right-handed alpha
Helix 40
AE4
B
207 219Right-handed alpha
Helix 41
AE5
B
239 263Right-handed alpha
Helix 42
AE6
B
292 302Right-handed alpha
Helix 43
AE7
B
310 323Right-handed alpha
Helix 44
AE8
B
324 327Right-handed 310
Helix 45
AE9
B
329 346Right-handed alpha
Helix 46
AF1
B
350 357Right-handed alpha
Helix 47
AF2
B
359 370Right-handed alpha
Helix 48
AF3
B
372 382Right-handed alpha
Helix 49
AF4
B
426 442Right-handed alpha
Helix 50
AF5
B
442 471Right-handed alpha
Helix 51
AF6
B
478 491Right-handed alpha
Helix 52
AF7
B
493 505Right-handed alpha
Helix 53
AF8
B
507 521Right-handed alpha
Helix 54
AF9
B
525 534Right-handed alpha
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There are 6 sheets in PDB entry 9HXL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 237first strand
Strand 2
A
181 186anti-parallel
Strand 3
A
274 275anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 190first strand
Strand 2
A
268 269anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
205 206first strand
Strand 2
A
230 231anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
233 237first strand
Strand 2
B
181 186anti-parallel
Strand 3
B
274 275anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
189 190first strand
Strand 2
B
268 269anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
205 206first strand
Strand 2
B
230 231anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il