Analysis of interatomic Contacts of Structural Units in PDB entry:
9HZL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9HZL entry

There are 22 chains in PDB entry 9HZL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 2	LYS 82
B	MET 1	PRO 48
C	SER 79	PHE 265
D	ALA 2	LYS 63
E	GLU 19	LYS 91
F	ALA 6	LYS 111
G	VAL 2	LYS 57
H	SER 85	LYS 325
J	MET 1	TRP 379
K	PRO 32	LEU 453
L	THR 35	PHE 480
N	GLY 2	LYS 82
O	MET 1	GLY 57
P	SER 79	GLY 274
Q	ALA 2	LYS 63
R	GLU 18	LYS 91
S	ALA 6	LYS 111
T	VAL 2	PHE 52
U	SER 85	LYS 325
V	MET 1	TRP 379
W	PRO 35	LEU 453
Y	THR 35	PHE 480

There are185 helices in PDB entry 9HZL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	21	24	Right-handed 310
Helix 2	AA2	A	33	45	Right-handed alpha
Helix 3	AA3	A	49	71	Right-handed alpha
Helix 4	AA4	B	3	7	Right-handed 310
Helix 5	AA5	C	79	83	Right-handed 310
Helix 6	AA6	C	93	97	Right-handed 310
Helix 7	AA7	C	103	142	Right-handed alpha
Helix 8	AA8	C	143	150	Right-handed alpha
Helix 9	AA9	C	180	190	Right-handed alpha
Helix 10	AB1	D	3	15	Right-handed alpha
Helix 11	AB2	D	17	48	Right-handed alpha
Helix 12	AB3	D	52	60	Right-handed 310
Helix 13	AB4	E	28	37	Right-handed alpha
Helix 14	AB5	E	40	60	Right-handed alpha
Helix 15	AB6	E	67	87	Right-handed alpha
Helix 16	AB7	E	88	90	Right-handed 310
Helix 17	AB8	F	10	25	Right-handed alpha
Helix 18	AB9	F	26	31	Right-handed 310
Helix 19	AC1	F	34	38	Right-handed 310
Helix 20	AC2	F	41	51	Right-handed alpha
Helix 21	AC3	F	52	73	Right-handed alpha
Helix 22	AC4	F	77	81	Right-handed 310
Helix 23	AC5	F	91	110	Right-handed alpha
Helix 24	AC6	G	7	37	Right-handed alpha
Helix 25	AC7	G	38	43	Right-handed alpha
Helix 26	AC8	G	47	52	Right-handed 310
Helix 27	AC9	H	106	120	Right-handed alpha
Helix 28	AD1	H	141	150	Right-handed alpha
Helix 29	AD2	H	181	189	Right-handed alpha
Helix 30	AD3	H	199	204	Right-handed alpha
Helix 31	AD4	H	206	217	Right-handed alpha
Helix 32	AD5	H	262	279	Right-handed alpha
Helix 33	AD6	H	281	316	Right-handed alpha
Helix 34	AD7	J	3	7	Right-handed 310
Helix 35	AD8	J	8	18	Right-handed alpha
Helix 36	AD9	J	28	31	Right-handed 310
Helix 37	AE1	J	32	53	Right-handed alpha
Helix 38	AE2	J	60	72	Right-handed alpha
Helix 39	AE3	J	75	105	Right-handed alpha
Helix 40	AE4	J	106	108	Right-handed 310
Helix 41	AE5	J	109	131	Right-handed alpha
Helix 42	AE6	J	136	149	Right-handed alpha
Helix 43	AE7	J	156	166	Right-handed alpha
Helix 44	AE8	J	171	202	Right-handed alpha
Helix 45	AE9	J	213	215	Right-handed 310
Helix 46	AF1	J	220	246	Right-handed alpha
Helix 47	AF2	J	271	273	Right-handed 310
Helix 48	AF3	J	274	284	Right-handed alpha
Helix 49	AF4	J	286	308	Right-handed alpha
Helix 50	AF5	J	314	317	Right-handed 310
Helix 51	AF6	J	318	340	Right-handed alpha
Helix 52	AF7	J	344	364	Right-handed alpha
Helix 53	AF8	J	364	378	Right-handed alpha
Helix 54	AF9	K	68	72	Right-handed 310
Helix 55	AG1	K	78	84	Right-handed alpha
Helix 56	AG2	K	85	87	Right-handed 310
Helix 57	AG3	K	95	107	Right-handed alpha
Helix 58	AG4	K	129	143	Right-handed alpha
Helix 59	AG5	K	147	155	Right-handed alpha
Helix 60	AG6	K	156	167	Right-handed alpha
Helix 61	AG7	K	168	182	Right-handed alpha
Helix 62	AG8	K	193	197	Right-handed 310
Helix 63	AG9	K	201	213	Right-handed alpha
Helix 64	AH1	K	214	216	Right-handed 310
Helix 65	AH2	K	226	235	Right-handed alpha
Helix 66	AH3	K	236	240	Right-handed 310
Helix 67	AH4	K	280	293	Right-handed alpha
Helix 68	AH5	K	307	315	Right-handed alpha
Helix 69	AH6	K	346	363	Right-handed alpha
Helix 70	AH7	K	367	388	Right-handed alpha
Helix 71	AH8	K	388	403	Right-handed alpha
Helix 72	AH9	K	408	418	Right-handed alpha
Helix 73	AI1	K	420	434	Right-handed alpha
Helix 74	AI2	L	37	42	Right-handed alpha
Helix 75	AI3	L	43	45	Right-handed 310
Helix 76	AI4	L	78	82	Right-handed 310
Helix 77	AI5	L	83	87	Right-handed 310
Helix 78	AI6	L	88	97	Right-handed alpha
Helix 79	AI7	L	107	116	Right-handed alpha
Helix 80	AI8	L	139	153	Right-handed alpha
Helix 81	AI9	L	157	178	Right-handed alpha
Helix 82	AJ1	L	178	192	Right-handed alpha
Helix 83	AJ2	L	204	209	Right-handed alpha
Helix 84	AJ3	L	214	224	Right-handed alpha
Helix 85	AJ4	L	238	251	Right-handed alpha
Helix 86	AJ5	L	257	261	Right-handed 310
Helix 87	AJ6	L	299	312	Right-handed alpha
Helix 88	AJ7	L	326	333	Right-handed alpha
Helix 89	AJ8	L	364	382	Right-handed alpha
Helix 90	AJ9	L	384	404	Right-handed alpha
Helix 91	AK1	L	405	420	Right-handed alpha
Helix 92	AK2	L	425	435	Right-handed alpha
Helix 93	AK3	L	437	449	Right-handed alpha
Helix 94	AK4	L	467	474	Right-handed alpha
Helix 95	AK5	N	21	24	Right-handed 310
Helix 96	AK6	N	33	45	Right-handed alpha
Helix 97	AK7	N	49	72	Right-handed alpha
Helix 98	AK8	N	74	78	Right-handed 310
Helix 99	AK9	P	93	97	Right-handed 310
Helix 100	AL1	P	105	142	Right-handed alpha
Helix 101	AL2	P	143	150	Right-handed alpha
Helix 102	AL3	P	180	190	Right-handed alpha
Helix 103	AL4	P	200	205	Right-handed alpha
Helix 104	AL5	Q	5	14	Right-handed alpha
Helix 105	AL6	Q	17	48	Right-handed alpha
Helix 106	AL7	Q	52	60	Right-handed 310
Helix 107	AL8	R	19	26	Right-handed alpha
Helix 108	AL9	R	31	39	Right-handed alpha
Helix 109	AM1	R	40	60	Right-handed alpha
Helix 110	AM2	R	67	90	Right-handed alpha
Helix 111	AM3	S	8	25	Right-handed alpha
Helix 112	AM4	S	26	31	Right-handed 310
Helix 113	AM5	S	33	37	Right-handed 310
Helix 114	AM6	S	41	50	Right-handed alpha
Helix 115	AM7	S	52	72	Right-handed alpha
Helix 116	AM8	S	77	81	Right-handed 310
Helix 117	AM9	S	91	110	Right-handed alpha
Helix 118	AN1	S	111	111	Right-handed 310
Helix 119	AN2	T	2	6	Right-handed 310
Helix 120	AN3	T	7	37	Right-handed alpha
Helix 121	AN4	T	38	43	Right-handed alpha
Helix 122	AN5	U	106	120	Right-handed alpha
Helix 123	AN6	U	141	151	Right-handed alpha
Helix 124	AN7	U	181	189	Right-handed alpha
Helix 125	AN8	U	199	204	Right-handed alpha
Helix 126	AN9	U	207	216	Right-handed alpha
Helix 127	AO1	U	262	278	Right-handed alpha
Helix 128	AO2	U	281	316	Right-handed alpha
Helix 129	AO3	V	3	7	Right-handed 310
Helix 130	AO4	V	8	18	Right-handed alpha
Helix 131	AO5	V	28	31	Right-handed 310
Helix 132	AO6	V	32	53	Right-handed alpha
Helix 133	AO7	V	61	73	Right-handed alpha
Helix 134	AO8	V	75	105	Right-handed alpha
Helix 135	AO9	V	106	108	Right-handed 310
Helix 136	AP1	V	109	133	Right-handed alpha
Helix 137	AP2	V	136	148	Right-handed alpha
Helix 138	AP3	V	149	153	Right-handed 310
Helix 139	AP4	V	157	166	Right-handed alpha
Helix 140	AP5	V	171	204	Right-handed alpha
Helix 141	AP6	V	223	246	Right-handed alpha
Helix 142	AP7	V	271	274	Right-handed 310
Helix 143	AP8	V	275	284	Right-handed alpha
Helix 144	AP9	V	286	308	Right-handed alpha
Helix 145	AQ1	V	318	340	Right-handed alpha
Helix 146	AQ2	V	344	364	Right-handed alpha
Helix 147	AQ3	V	364	377	Right-handed alpha
Helix 148	AQ4	W	68	72	Right-handed 310
Helix 149	AQ5	W	78	84	Right-handed alpha
Helix 150	AQ6	W	95	107	Right-handed alpha
Helix 151	AQ7	W	129	143	Right-handed alpha
Helix 152	AQ8	W	147	167	Right-handed alpha
Helix 153	AQ9	W	168	180	Right-handed alpha
Helix 154	AR1	W	193	197	Right-handed 310
Helix 155	AR2	W	201	213	Right-handed alpha
Helix 156	AR3	W	214	216	Right-handed 310
Helix 157	AR4	W	226	238	Right-handed alpha
Helix 158	AR5	W	280	293	Right-handed alpha
Helix 159	AR6	W	309	317	Right-handed alpha
Helix 160	AR7	W	346	363	Right-handed alpha
Helix 161	AR8	W	369	386	Right-handed alpha
Helix 162	AR9	W	388	400	Right-handed alpha
Helix 163	AS1	W	408	418	Right-handed alpha
Helix 164	AS2	W	421	434	Right-handed alpha
Helix 165	AS3	W	449	453	Right-handed 310
Helix 166	AS4	Y	37	42	Right-handed alpha
Helix 167	AS5	Y	78	82	Right-handed 310
Helix 168	AS6	Y	83	87	Right-handed 310
Helix 169	AS7	Y	88	97	Right-handed alpha
Helix 170	AS8	Y	105	117	Right-handed alpha
Helix 171	AS9	Y	139	153	Right-handed alpha
Helix 172	AT1	Y	157	178	Right-handed alpha
Helix 173	AT2	Y	179	192	Right-handed alpha
Helix 174	AT3	Y	204	209	Right-handed alpha
Helix 175	AT4	Y	212	224	Right-handed alpha
Helix 176	AT5	Y	238	251	Right-handed alpha
Helix 177	AT6	Y	257	261	Right-handed 310
Helix 178	AT7	Y	299	312	Right-handed alpha
Helix 179	AT8	Y	326	333	Right-handed alpha
Helix 180	AT9	Y	364	381	Right-handed alpha
Helix 181	AU1	Y	384	403	Right-handed alpha
Helix 182	AU2	Y	405	421	Right-handed alpha
Helix 183	AU3	Y	425	435	Right-handed alpha
Helix 184	AU4	Y	437	449	Right-handed alpha
Helix 185	AU5	Y	467	475	Right-handed alpha

There are 19 sheets in PDB entry 9HZL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	318	321	first strand
Strand 2	A	12	19	anti-parallel
Strand 3	L	273	279	anti-parallel
Strand 4	L	455	460	parallel
Strand 5	L	288	293	anti-parallel
Strand 6	L	351	360	anti-parallel
Strand 7	L	338	348	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	14	16	first strand
Strand 2	K	109	114	anti-parallel
Strand 3	K	119	126	anti-parallel
Strand 4	K	58	65	anti-parallel
Strand 5	K	218	222	anti-parallel
Strand 6	K	48	51	parallel
Strand 7	K	39	42	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	165	169	first strand
Strand 2	C	172	177	anti-parallel
Strand 3	C	211	214	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	234	235	first strand
Strand 2	C	242	243	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	154	158	first strand
Strand 2	H	164	167	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	22	24	first strand
Strand 2	J	217	219	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	257	259	first strand
Strand 2	K	436	440	parallel
Strand 3	K	271	274	anti-parallel
Strand 4	K	334	343	anti-parallel
Strand 5	K	266	267	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	257	259	first strand
Strand 2	K	436	440	parallel
Strand 3	K	271	274	anti-parallel
Strand 4	K	334	343	anti-parallel
Strand 5	K	322	329	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	49	52	first strand
Strand 2	L	58	63	anti-parallel
Strand 3	L	230	235	parallel
Strand 4	L	68	75	anti-parallel
Strand 5	L	129	136	anti-parallel
Strand 6	L	119	124	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	318	321	first strand
Strand 2	N	14	19	anti-parallel
Strand 3	Y	273	278	anti-parallel
Strand 4	Y	455	460	parallel
Strand 5	Y	285	293	anti-parallel
Strand 6	Y	352	360	anti-parallel
Strand 7	Y	338	347	anti-parallel
Strand 8	Y	314	315	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	164	169	first strand
Strand 2	P	172	178	anti-parallel
Strand 3	P	210	214	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	225	226	first strand
Strand 2	P	234	236	anti-parallel
Strand 3	P	241	242	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	263	265	first strand
Strand 2	P	271	273	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	154	156	first strand
Strand 2	U	165	167	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	232	233	first strand
Strand 2	U	241	242	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	23	24	first strand
Strand 2	V	217	218	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	38	42	first strand
Strand 2	W	48	52	anti-parallel
Strand 3	W	218	222	parallel
Strand 4	W	58	65	anti-parallel
Strand 5	W	119	126	anti-parallel
Strand 6	W	109	114	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	257	261	first strand
Strand 2	W	436	442	parallel
Strand 3	W	266	275	anti-parallel
Strand 4	W	334	343	anti-parallel
Strand 5	W	322	329	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	49	52	first strand
Strand 2	Y	58	63	anti-parallel
Strand 3	Y	230	235	parallel
Strand 4	Y	68	75	anti-parallel
Strand 5	Y	129	136	anti-parallel
Strand 6	Y	119	123	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9HZL

Analysis of interatomic Contacts of Structural Units in PDB entry:
9HZL