Analysis of interatomic Contacts of Structural Units in PDB entry:
9I0F

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9I0F entry

There are 3 chains in PDB entry 9I0F (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS -4	ALA 460
B	ALA 2	THR 451
C	HIS -4	VAL 389

There are179 helices in PDB entry 9I0F. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	-3	11	Right-handed alpha
Helix 2	AA2	A	37	47	Right-handed alpha
Helix 3	AA3	A	59	64	Right-handed alpha
Helix 4	AA4	A	78	82	Right-handed 310
Helix 5	AA5	A	89	95	Right-handed alpha
Helix 6	AA6	A	97	114	Right-handed alpha
Helix 7	AA7	A	123	129	Right-handed alpha
Helix 8	AA8	A	132	145	Right-handed alpha
Helix 9	AA9	A	154	158	Right-handed 310
Helix 10	AB1	A	159	175	Right-handed alpha
Helix 11	AB2	A	205	212	Right-handed 310
Helix 12	AB3	A	213	221	Right-handed alpha
Helix 13	AB4	A	233	239	Right-handed alpha
Helix 14	AB5	A	240	243	Right-handed 310
Helix 15	AB6	A	254	266	Right-handed alpha
Helix 16	AB7	A	276	292	Right-handed alpha
Helix 17	AB8	A	293	323	Right-handed alpha
Helix 18	AB9	A	335	338	Right-handed 310
Helix 19	AC1	A	339	345	Right-handed alpha
Helix 20	AC2	A	359	370	Right-handed alpha
Helix 21	AC3	A	381	392	Right-handed alpha
Helix 22	AC4	A	400	402	Right-handed 310
Helix 23	AC5	A	403	410	Right-handed alpha
Helix 24	AC6	A	426	443	Right-handed alpha
Helix 25	AC7	A	445	452	Right-handed alpha
Helix 26	AC8	B	19	30	Right-handed alpha
Helix 27	AC9	B	41	57	Right-handed alpha
Helix 28	AD1	B	68	75	Right-handed alpha
Helix 29	AD2	B	76	91	Right-handed alpha
Helix 30	AD3	B	101	108	Right-handed alpha
Helix 31	AD4	B	110	122	Right-handed alpha
Helix 32	AD5	B	123	126	Right-handed 310
Helix 33	AD6	B	141	158	Right-handed alpha
Helix 34	AD7	B	181	195	Right-handed alpha
Helix 35	AD8	B	227	232	Right-handed alpha
Helix 36	AD9	B	247	259	Right-handed alpha
Helix 37	AE1	B	270	286	Right-handed alpha
Helix 38	AE2	B	290	312	Right-handed alpha
Helix 39	AE3	B	321	335	Right-handed alpha
Helix 40	AE4	B	348	353	Right-handed alpha
Helix 41	AE5	B	363	374	Right-handed alpha
Helix 42	AE6	B	384	393	Right-handed alpha
Helix 43	AE7	B	408	412	Right-handed 310
Helix 44	AE8	B	415	435	Right-handed alpha
Helix 45	AE9	C	-3	11	Right-handed alpha
Helix 46	AF1	C	37	47	Right-handed alpha
Helix 47	AF2	C	59	64	Right-handed alpha
Helix 48	AF3	C	78	82	Right-handed 310
Helix 49	AF4	C	89	95	Right-handed alpha
Helix 50	AF5	C	97	114	Right-handed alpha
Helix 51	AF6	C	123	129	Right-handed alpha
Helix 52	AF7	C	132	145	Right-handed alpha
Helix 53	AF8	C	154	158	Right-handed 310
Helix 54	AF9	C	159	175	Right-handed alpha
Helix 55	AG1	C	205	212	Right-handed 310
Helix 56	AG2	C	213	221	Right-handed alpha
Helix 57	AG3	C	233	238	Right-handed alpha
Helix 58	AG4	C	239	243	Right-handed 310
Helix 59	AG5	C	254	266	Right-handed alpha
Helix 60	AG6	C	276	292	Right-handed alpha
Helix 61	AG7	C	293	323	Right-handed alpha
Helix 62	AG8	C	335	338	Right-handed 310
Helix 63	AG9	C	339	345	Right-handed alpha
Helix 64	AH1	C	359	370	Right-handed alpha
Helix 65	AH2	C	381	392	Right-handed alpha
Helix 66	AH3	C	400	402	Right-handed 310
Helix 67	AH4	C	403	410	Right-handed alpha
Helix 68	AH5	C	426	443	Right-handed alpha
Helix 69	AH6	C	445	452	Right-handed alpha
Helix 70	AH7	D	19	30	Right-handed alpha
Helix 71	AH8	D	41	57	Right-handed alpha
Helix 72	AH9	D	68	75	Right-handed alpha
Helix 73	AI1	D	76	91	Right-handed alpha
Helix 74	AI2	D	101	108	Right-handed alpha
Helix 75	AI3	D	110	122	Right-handed alpha
Helix 76	AI4	D	123	126	Right-handed 310
Helix 77	AI5	D	141	158	Right-handed alpha
Helix 78	AI6	D	181	195	Right-handed alpha
Helix 79	AI7	D	227	232	Right-handed alpha
Helix 80	AI8	D	247	259	Right-handed alpha
Helix 81	AI9	D	270	286	Right-handed alpha
Helix 82	AJ1	D	290	312	Right-handed alpha
Helix 83	AJ2	D	321	334	Right-handed alpha
Helix 84	AJ3	D	348	353	Right-handed alpha
Helix 85	AJ4	D	363	375	Right-handed alpha
Helix 86	AJ5	D	385	393	Right-handed alpha
Helix 87	AJ6	D	408	412	Right-handed 310
Helix 88	AJ7	D	415	435	Right-handed alpha
Helix 89	AJ8	E	-3	11	Right-handed alpha
Helix 90	AJ9	E	37	47	Right-handed alpha
Helix 91	AK1	E	59	64	Right-handed alpha
Helix 92	AK2	E	78	82	Right-handed 310
Helix 93	AK3	E	89	95	Right-handed alpha
Helix 94	AK4	E	97	114	Right-handed alpha
Helix 95	AK5	E	123	129	Right-handed alpha
Helix 96	AK6	E	132	145	Right-handed alpha
Helix 97	AK7	E	154	158	Right-handed 310
Helix 98	AK8	E	159	175	Right-handed alpha
Helix 99	AK9	E	205	212	Right-handed 310
Helix 100	AL1	E	213	221	Right-handed alpha
Helix 101	AL2	E	233	238	Right-handed alpha
Helix 102	AL3	E	254	266	Right-handed alpha
Helix 103	AL4	E	276	292	Right-handed alpha
Helix 104	AL5	E	293	316	Right-handed alpha
Helix 105	AL6	E	318	323	Right-handed alpha
Helix 106	AL7	E	335	338	Right-handed 310
Helix 107	AL8	E	339	345	Right-handed alpha
Helix 108	AL9	E	359	370	Right-handed alpha
Helix 109	AM1	E	381	392	Right-handed alpha
Helix 110	AM2	E	400	402	Right-handed 310
Helix 111	AM3	E	403	410	Right-handed alpha
Helix 112	AM4	E	426	443	Right-handed alpha
Helix 113	AM5	E	445	452	Right-handed alpha
Helix 114	AM6	F	19	30	Right-handed alpha
Helix 115	AM7	F	41	57	Right-handed alpha
Helix 116	AM8	F	68	75	Right-handed alpha
Helix 117	AM9	F	76	91	Right-handed alpha
Helix 118	AN1	F	101	108	Right-handed alpha
Helix 119	AN2	F	110	122	Right-handed alpha
Helix 120	AN3	F	123	126	Right-handed 310
Helix 121	AN4	F	141	158	Right-handed alpha
Helix 122	AN5	F	181	195	Right-handed alpha
Helix 123	AN6	F	227	232	Right-handed alpha
Helix 124	AN7	F	233	237	Right-handed 310
Helix 125	AN8	F	247	259	Right-handed alpha
Helix 126	AN9	F	270	286	Right-handed alpha
Helix 127	AO1	F	290	307	Right-handed alpha
Helix 128	AO2	F	307	312	Right-handed alpha
Helix 129	AO3	F	321	334	Right-handed alpha
Helix 130	AO4	F	348	353	Right-handed alpha
Helix 131	AO5	F	363	375	Right-handed alpha
Helix 132	AO6	F	384	393	Right-handed alpha
Helix 133	AO7	F	408	412	Right-handed 310
Helix 134	AO8	F	415	434	Right-handed alpha
Helix 135	AO9	G	-3	11	Right-handed alpha
Helix 136	AP1	G	37	47	Right-handed alpha
Helix 137	AP2	G	59	64	Right-handed alpha
Helix 138	AP3	G	78	82	Right-handed 310
Helix 139	AP4	G	89	95	Right-handed alpha
Helix 140	AP5	G	97	114	Right-handed alpha
Helix 141	AP6	G	123	129	Right-handed alpha
Helix 142	AP7	G	132	145	Right-handed alpha
Helix 143	AP8	G	154	158	Right-handed 310
Helix 144	AP9	G	159	175	Right-handed alpha
Helix 145	AQ1	G	205	212	Right-handed 310
Helix 146	AQ2	G	213	221	Right-handed alpha
Helix 147	AQ3	G	233	238	Right-handed alpha
Helix 148	AQ4	G	239	243	Right-handed 310
Helix 149	AQ5	G	254	266	Right-handed alpha
Helix 150	AQ6	G	276	292	Right-handed alpha
Helix 151	AQ7	G	293	323	Right-handed alpha
Helix 152	AQ8	G	335	338	Right-handed 310
Helix 153	AQ9	G	339	345	Right-handed alpha
Helix 154	AR1	G	359	370	Right-handed alpha
Helix 155	AR2	G	381	392	Right-handed alpha
Helix 156	AR3	G	400	402	Right-handed 310
Helix 157	AR4	G	403	410	Right-handed alpha
Helix 158	AR5	G	426	443	Right-handed alpha
Helix 159	AR6	G	445	452	Right-handed alpha
Helix 160	AR7	H	19	30	Right-handed alpha
Helix 161	AR8	H	41	57	Right-handed alpha
Helix 162	AR9	H	68	75	Right-handed alpha
Helix 163	AS1	H	76	91	Right-handed alpha
Helix 164	AS2	H	101	108	Right-handed alpha
Helix 165	AS3	H	110	122	Right-handed alpha
Helix 166	AS4	H	123	126	Right-handed 310
Helix 167	AS5	H	141	158	Right-handed alpha
Helix 168	AS6	H	181	195	Right-handed alpha
Helix 169	AS7	H	227	232	Right-handed alpha
Helix 170	AS8	H	233	237	Right-handed 310
Helix 171	AS9	H	247	259	Right-handed alpha
Helix 172	AT1	H	270	286	Right-handed alpha
Helix 173	AT2	H	290	312	Right-handed alpha
Helix 174	AT3	H	321	335	Right-handed alpha
Helix 175	AT4	H	348	353	Right-handed alpha
Helix 176	AT5	H	363	375	Right-handed alpha
Helix 177	AT6	H	384	393	Right-handed alpha
Helix 178	AT7	H	408	412	Right-handed 310
Helix 179	AT8	H	415	435	Right-handed alpha

There are 24 sheets in PDB entry 9I0F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	148	151	first strand
Strand 2	A	118	121	parallel
Strand 3	A	53	56	parallel
Strand 4	A	84	85	parallel
Strand 5	B	12	13	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	222	229	first strand
Strand 2	A	196	203	parallel
Strand 3	A	245	249	parallel
Strand 4	A	269	272	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	350	353	first strand
Strand 2	A	327	330	parallel
Strand 3	A	396	399	parallel
Strand 4	A	414	416	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	5	first strand
Strand 2	B	358	361	parallel
Strand 3	B	338	344	parallel
Strand 4	B	315	319	parallel
Strand 5	B	378	381	parallel
Strand 6	B	396	398	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	63	64	first strand
Strand 2	B	34	39	parallel
Strand 3	B	95	100	parallel
Strand 4	B	130	133	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	198	202	first strand
Strand 2	B	171	176	parallel
Strand 3	B	239	243	parallel
Strand 4	B	262	265	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	148	151	first strand
Strand 2	C	118	121	parallel
Strand 3	C	53	56	parallel
Strand 4	C	84	85	parallel
Strand 5	D	12	13	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	222	229	first strand
Strand 2	C	196	203	parallel
Strand 3	C	245	249	parallel
Strand 4	C	269	272	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	350	353	first strand
Strand 2	C	327	330	parallel
Strand 3	C	396	399	parallel
Strand 4	C	414	416	parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	5	first strand
Strand 2	D	358	361	parallel
Strand 3	D	338	344	parallel
Strand 4	D	315	319	parallel
Strand 5	D	378	381	parallel
Strand 6	D	396	398	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	63	64	first strand
Strand 2	D	34	39	parallel
Strand 3	D	95	100	parallel
Strand 4	D	130	133	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	198	202	first strand
Strand 2	D	171	176	parallel
Strand 3	D	239	243	parallel
Strand 4	D	262	265	parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	148	151	first strand
Strand 2	E	118	121	parallel
Strand 3	E	53	56	parallel
Strand 4	E	84	85	parallel
Strand 5	F	12	13	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	222	229	first strand
Strand 2	E	196	203	parallel
Strand 3	E	245	249	parallel
Strand 4	E	269	272	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	350	353	first strand
Strand 2	E	327	330	parallel
Strand 3	E	396	399	parallel
Strand 4	E	414	416	parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	3	5	first strand
Strand 2	F	358	361	parallel
Strand 3	F	338	344	parallel
Strand 4	F	315	319	parallel
Strand 5	F	378	381	parallel
Strand 6	F	396	398	parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	63	64	first strand
Strand 2	F	34	39	parallel
Strand 3	F	95	100	parallel
Strand 4	F	130	133	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	198	202	first strand
Strand 2	F	171	176	parallel
Strand 3	F	239	243	parallel
Strand 4	F	262	265	parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	148	151	first strand
Strand 2	G	118	122	parallel
Strand 3	G	53	57	parallel
Strand 4	G	84	85	parallel
Strand 5	H	12	13	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	222	229	first strand
Strand 2	G	196	203	parallel
Strand 3	G	245	249	parallel
Strand 4	G	269	272	parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	350	353	first strand
Strand 2	G	327	330	parallel
Strand 3	G	396	399	parallel
Strand 4	G	414	416	parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	5	first strand
Strand 2	H	358	361	parallel
Strand 3	H	338	344	parallel
Strand 4	H	315	319	parallel
Strand 5	H	378	381	parallel
Strand 6	H	396	397	parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	63	64	first strand
Strand 2	H	34	39	parallel
Strand 3	H	95	100	parallel
Strand 4	H	130	133	parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	198	202	first strand
Strand 2	H	171	176	parallel
Strand 3	H	239	243	parallel
Strand 4	H	262	265	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9I0F

Analysis of interatomic Contacts of Structural Units in PDB entry:
9I0F