Analysis of interatomic Contacts of Structural Units in PDB entry:
9I16

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9I16 entry

There are 3 chains in PDB entry 9I16 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 62	LYS 592
B	MET 62	LYS 592
C	MET 62	THR 254

There are146 helices in PDB entry 9I16. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	64	69	Right-handed 310
Helix 2	AA2	A	75	85	Right-handed alpha
Helix 3	AA3	A	95	105	Right-handed alpha
Helix 4	AA4	A	120	130	Right-handed alpha
Helix 5	AA5	A	140	152	Right-handed alpha
Helix 6	AA6	A	166	179	Right-handed alpha
Helix 7	AA7	A	190	196	Right-handed alpha
Helix 8	AA8	A	199	210	Right-handed alpha
Helix 9	AA9	A	221	225	Right-handed 310
Helix 10	AB1	A	232	237	Right-handed 310
Helix 11	AB2	A	238	245	Right-handed alpha
Helix 12	AB3	A	258	269	Right-handed alpha
Helix 13	AB4	A	296	312	Right-handed alpha
Helix 14	AB5	A	323	337	Right-handed alpha
Helix 15	AB6	A	349	362	Right-handed alpha
Helix 16	AB7	A	394	403	Right-handed alpha
Helix 17	AB8	A	419	430	Right-handed alpha
Helix 18	AB9	A	435	449	Right-handed alpha
Helix 19	AC1	A	453	460	Right-handed alpha
Helix 20	AC2	A	475	480	Right-handed alpha
Helix 21	AC3	A	489	506	Right-handed alpha
Helix 22	AC4	A	511	520	Right-handed alpha
Helix 23	AC5	A	524	528	Right-handed 310
Helix 24	AC6	A	538	552	Right-handed alpha
Helix 25	AC7	A	574	581	Right-handed 310
Helix 26	AC8	B	64	69	Right-handed 310
Helix 27	AC9	B	75	86	Right-handed alpha
Helix 28	AD1	B	95	105	Right-handed alpha
Helix 29	AD2	B	120	130	Right-handed alpha
Helix 30	AD3	B	140	154	Right-handed alpha
Helix 31	AD4	B	166	179	Right-handed alpha
Helix 32	AD5	B	190	196	Right-handed alpha
Helix 33	AD6	B	197	210	Right-handed alpha
Helix 34	AD7	B	220	225	Right-handed 310
Helix 35	AD8	B	232	238	Right-handed 310
Helix 36	AD9	B	239	245	Right-handed alpha
Helix 37	AE1	B	258	264	Right-handed alpha
Helix 38	AE2	B	265	270	Right-handed alpha
Helix 39	AE3	B	296	312	Right-handed alpha
Helix 40	AE4	B	323	337	Right-handed alpha
Helix 41	AE5	B	349	362	Right-handed alpha
Helix 42	AE6	B	394	403	Right-handed alpha
Helix 43	AE7	B	419	430	Right-handed alpha
Helix 44	AE8	B	435	449	Right-handed alpha
Helix 45	AE9	B	453	460	Right-handed alpha
Helix 46	AF1	B	475	480	Right-handed alpha
Helix 47	AF2	B	489	506	Right-handed alpha
Helix 48	AF3	B	511	520	Right-handed alpha
Helix 49	AF4	B	524	528	Right-handed 310
Helix 50	AF5	B	538	552	Right-handed alpha
Helix 51	AF6	B	574	581	Right-handed 310
Helix 52	AF7	C	64	69	Right-handed 310
Helix 53	AF8	C	75	86	Right-handed alpha
Helix 54	AF9	C	95	105	Right-handed alpha
Helix 55	AG1	C	120	128	Right-handed alpha
Helix 56	AG2	C	140	154	Right-handed alpha
Helix 57	AG3	C	166	179	Right-handed alpha
Helix 58	AG4	C	190	196	Right-handed alpha
Helix 59	AG5	C	197	210	Right-handed alpha
Helix 60	AG6	C	221	225	Right-handed 310
Helix 61	AG7	C	232	238	Right-handed 310
Helix 62	AG8	C	239	245	Right-handed alpha
Helix 63	AG9	C	258	269	Right-handed alpha
Helix 64	AH1	C	296	312	Right-handed alpha
Helix 65	AH2	C	323	337	Right-handed alpha
Helix 66	AH3	C	349	362	Right-handed alpha
Helix 67	AH4	C	394	403	Right-handed alpha
Helix 68	AH5	C	419	430	Right-handed alpha
Helix 69	AH6	C	435	449	Right-handed alpha
Helix 70	AH7	C	453	460	Right-handed alpha
Helix 71	AH8	C	475	480	Right-handed alpha
Helix 72	AH9	C	489	506	Right-handed alpha
Helix 73	AI1	C	511	520	Right-handed alpha
Helix 74	AI2	C	524	528	Right-handed 310
Helix 75	AI3	C	538	552	Right-handed alpha
Helix 76	AI4	C	574	581	Right-handed 310
Helix 77	AI5	D	65	69	Right-handed 310
Helix 78	AI6	D	75	86	Right-handed alpha
Helix 79	AI7	D	95	105	Right-handed alpha
Helix 80	AI8	D	120	130	Right-handed alpha
Helix 81	AI9	D	140	154	Right-handed alpha
Helix 82	AJ1	D	166	178	Right-handed alpha
Helix 83	AJ2	D	190	196	Right-handed alpha
Helix 84	AJ3	D	197	210	Right-handed alpha
Helix 85	AJ4	D	221	224	Right-handed 310
Helix 86	AJ5	D	232	237	Right-handed 310
Helix 87	AJ6	D	238	245	Right-handed alpha
Helix 88	AJ7	D	298	312	Right-handed alpha
Helix 89	AJ8	D	323	335	Right-handed alpha
Helix 90	AJ9	D	349	359	Right-handed alpha
Helix 91	AK1	D	394	403	Right-handed alpha
Helix 92	AK2	D	419	428	Right-handed alpha
Helix 93	AK3	D	435	449	Right-handed alpha
Helix 94	AK4	D	453	461	Right-handed alpha
Helix 95	AK5	D	489	506	Right-handed alpha
Helix 96	AK6	D	511	521	Right-handed alpha
Helix 97	AK7	D	524	528	Right-handed 310
Helix 98	AK8	D	538	552	Right-handed alpha
Helix 99	AK9	D	574	581	Right-handed 310
Helix 100	AL1	E	75	86	Right-handed alpha
Helix 101	AL2	E	95	105	Right-handed alpha
Helix 102	AL3	E	120	130	Right-handed alpha
Helix 103	AL4	E	140	155	Right-handed alpha
Helix 104	AL5	E	168	178	Right-handed alpha
Helix 105	AL6	E	190	196	Right-handed alpha
Helix 106	AL7	E	197	210	Right-handed alpha
Helix 107	AL8	E	220	225	Right-handed 310
Helix 108	AL9	E	232	237	Right-handed alpha
Helix 109	AM1	E	239	245	Right-handed alpha
Helix 110	AM2	E	298	312	Right-handed alpha
Helix 111	AM3	E	323	337	Right-handed alpha
Helix 112	AM4	E	349	359	Right-handed alpha
Helix 113	AM5	E	372	375	Right-handed 310
Helix 114	AM6	E	394	404	Right-handed alpha
Helix 115	AM7	E	419	428	Right-handed alpha
Helix 116	AM8	E	435	449	Right-handed alpha
Helix 117	AM9	E	453	460	Right-handed alpha
Helix 118	AN1	E	489	506	Right-handed alpha
Helix 119	AN2	E	511	521	Right-handed alpha
Helix 120	AN3	E	524	528	Right-handed 310
Helix 121	AN4	E	538	552	Right-handed alpha
Helix 122	AN5	E	574	581	Right-handed 310
Helix 123	AN6	F	75	86	Right-handed alpha
Helix 124	AN7	F	95	105	Right-handed alpha
Helix 125	AN8	F	120	130	Right-handed alpha
Helix 126	AN9	F	140	154	Right-handed alpha
Helix 127	AO1	F	166	179	Right-handed alpha
Helix 128	AO2	F	190	196	Right-handed alpha
Helix 129	AO3	F	197	210	Right-handed alpha
Helix 130	AO4	F	220	224	Right-handed 310
Helix 131	AO5	F	233	238	Right-handed alpha
Helix 132	AO6	F	239	245	Right-handed alpha
Helix 133	AO7	F	258	270	Right-handed alpha
Helix 134	AO8	F	296	312	Right-handed alpha
Helix 135	AO9	F	323	337	Right-handed alpha
Helix 136	AP1	F	351	358	Right-handed alpha
Helix 137	AP2	F	394	403	Right-handed alpha
Helix 138	AP3	F	419	428	Right-handed alpha
Helix 139	AP4	F	429	433	Right-handed 310
Helix 140	AP5	F	435	449	Right-handed alpha
Helix 141	AP6	F	453	462	Right-handed alpha
Helix 142	AP7	F	475	480	Right-handed alpha
Helix 143	AP8	F	489	506	Right-handed alpha
Helix 144	AP9	F	511	520	Right-handed alpha
Helix 145	AQ1	F	538	552	Right-handed alpha
Helix 146	AQ2	F	574	581	Right-handed 310

There are 24 sheets in PDB entry 9I16. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	158	161	first strand
Strand 2	A	186	189	parallel
Strand 3	A	133	137	parallel
Strand 4	A	213	219	parallel
Strand 5	A	249	254	parallel
Strand 6	A	109	112	parallel
Strand 7	A	275	278	parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	286	292	first strand
Strand 2	A	412	418	parallel
Strand 3	A	385	388	parallel
Strand 4	A	317	321	parallel
Strand 5	A	367	371	parallel
Strand 6	A	341	343	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	485	488	first strand
Strand 2	A	587	590	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	555	561	first strand
Strand 2	A	566	572	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	158	161	first strand
Strand 2	B	186	189	parallel
Strand 3	B	133	137	parallel
Strand 4	B	213	218	parallel
Strand 5	B	249	254	parallel
Strand 6	B	109	112	parallel
Strand 7	B	275	278	parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	286	292	first strand
Strand 2	B	412	418	parallel
Strand 3	B	385	388	parallel
Strand 4	B	317	321	parallel
Strand 5	B	367	371	parallel
Strand 6	B	341	344	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	484	488	first strand
Strand 2	B	587	591	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	555	561	first strand
Strand 2	B	566	572	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	158	161	first strand
Strand 2	C	186	189	parallel
Strand 3	C	133	137	parallel
Strand 4	C	213	219	parallel
Strand 5	C	249	254	parallel
Strand 6	C	109	112	parallel
Strand 7	C	275	278	parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	286	292	first strand
Strand 2	C	412	418	parallel
Strand 3	C	385	388	parallel
Strand 4	C	317	321	parallel
Strand 5	C	367	371	parallel
Strand 6	C	341	344	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	484	488	first strand
Strand 2	C	587	591	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	555	561	first strand
Strand 2	C	566	572	anti-parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	158	161	first strand
Strand 2	D	186	189	parallel
Strand 3	D	133	137	parallel
Strand 4	D	213	219	parallel
Strand 5	D	249	254	parallel
Strand 6	D	109	112	parallel
Strand 7	D	275	278	parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	286	292	first strand
Strand 2	D	412	418	parallel
Strand 3	D	383	388	parallel
Strand 4	D	316	320	parallel
Strand 5	D	367	370	parallel
Strand 6	D	341	344	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	487	488	first strand
Strand 2	D	587	588	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	555	561	first strand
Strand 2	D	566	572	anti-parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	159	161	first strand
Strand 2	E	186	189	parallel
Strand 3	E	134	137	parallel
Strand 4	E	215	218	parallel
Strand 5	E	249	254	parallel
Strand 6	E	109	112	parallel
Strand 7	E	275	278	parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	286	292	first strand
Strand 2	E	412	418	parallel
Strand 3	E	383	388	parallel
Strand 4	E	316	320	parallel
Strand 5	E	367	370	parallel
Strand 6	E	342	344	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	487	488	first strand
Strand 2	E	587	588	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	555	561	first strand
Strand 2	E	566	572	anti-parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	158	161	first strand
Strand 2	F	186	189	parallel
Strand 3	F	133	137	parallel
Strand 4	F	213	218	parallel
Strand 5	F	249	254	parallel
Strand 6	F	108	112	parallel
Strand 7	F	274	278	parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	286	292	first strand
Strand 2	F	412	418	parallel
Strand 3	F	383	388	parallel
Strand 4	F	316	320	parallel
Strand 5	F	367	370	parallel
Strand 6	F	341	344	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	487	488	first strand
Strand 2	F	587	588	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	555	561	first strand
Strand 2	F	566	572	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9I16

Analysis of interatomic Contacts of Structural Units in PDB entry:
9I16