Analysis of interatomic Contacts of Structural Units in PDB entry:
9I1I

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9I1I entry

There is 1 chain in PDB entry 9I1I (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 345	GLY 5150

There are220 helices in PDB entry 9I1I. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	359	361	Right-handed 310
Helix 2	AA2	A	375	378	Right-handed 310
Helix 3	AA3	A	410	412	Right-handed 310
Helix 4	AA4	A	488	513	Right-handed alpha
Helix 5	AA5	A	517	537	Right-handed alpha
Helix 6	AA6	A	549	552	Right-handed 310
Helix 7	AA7	A	554	575	Right-handed alpha
Helix 8	AA8	A	578	582	Right-handed 310
Helix 9	AA9	A	590	606	Right-handed alpha
Helix 10	AB1	A	610	612	Right-handed 310
Helix 11	AB2	A	613	621	Right-handed alpha
Helix 12	AB3	A	628	636	Right-handed alpha
Helix 13	AB4	A	637	640	Right-handed 310
Helix 14	AB5	A	643	656	Right-handed alpha
Helix 15	AB6	A	662	665	Right-handed 310
Helix 16	AB7	A	666	673	Right-handed alpha
Helix 17	AB8	A	688	693	Right-handed alpha
Helix 18	AB9	A	700	705	Right-handed alpha
Helix 19	AC1	A	711	720	Right-handed alpha
Helix 20	AC2	A	721	726	Right-handed 310
Helix 21	AC3	A	728	736	Right-handed alpha
Helix 22	AC4	A	739	741	Right-handed 310
Helix 23	AC5	A	742	750	Right-handed alpha
Helix 24	AC6	A	750	757	Right-handed alpha
Helix 25	AC7	A	759	775	Right-handed alpha
Helix 26	AC8	A	781	800	Right-handed alpha
Helix 27	AC9	A	803	807	Right-handed 310
Helix 28	AD1	A	810	827	Right-handed alpha
Helix 29	AD2	A	835	850	Right-handed alpha
Helix 30	AD3	A	864	889	Right-handed alpha
Helix 31	AD4	A	908	917	Right-handed alpha
Helix 32	AD5	A	929	940	Right-handed alpha
Helix 33	AD6	A	942	951	Right-handed alpha
Helix 34	AD7	A	962	982	Right-handed alpha
Helix 35	AD8	A	994	1009	Right-handed alpha
Helix 36	AD9	A	1021	1031	Right-handed alpha
Helix 37	AE1	A	1033	1044	Right-handed alpha
Helix 38	AE2	A	1052	1071	Right-handed alpha
Helix 39	AE3	A	1079	1089	Right-handed alpha
Helix 40	AE4	A	1089	1102	Right-handed alpha
Helix 41	AE5	A	1113	1144	Right-handed alpha
Helix 42	AE6	A	1154	1159	Right-handed alpha
Helix 43	AE7	A	1166	1171	Right-handed 310
Helix 44	AE8	A	1190	1203	Right-handed alpha
Helix 45	AE9	A	1206	1218	Right-handed alpha
Helix 46	AF1	A	1219	1221	Right-handed 310
Helix 47	AF2	A	1234	1241	Right-handed alpha
Helix 48	AF3	A	1241	1259	Right-handed alpha
Helix 49	AF4	A	1262	1270	Right-handed alpha
Helix 50	AF5	A	1277	1288	Right-handed alpha
Helix 51	AF6	A	1298	1330	Right-handed alpha
Helix 52	AF7	A	1338	1346	Right-handed alpha
Helix 53	AF8	A	1363	1369	Right-handed alpha
Helix 54	AF9	A	1377	1387	Right-handed alpha
Helix 55	AG1	A	1387	1398	Right-handed alpha
Helix 56	AG2	A	1403	1415	Right-handed alpha
Helix 57	AG3	A	1418	1440	Right-handed alpha
Helix 58	AG4	A	1447	1463	Right-handed alpha
Helix 59	AG5	A	1467	1477	Right-handed alpha
Helix 60	AG6	A	1478	1487	Right-handed alpha
Helix 61	AG7	A	1495	1507	Right-handed alpha
Helix 62	AG8	A	1521	1524	Right-handed 310
Helix 63	AG9	A	1544	1557	Right-handed alpha
Helix 64	AH1	A	1563	1594	Right-handed alpha
Helix 65	AH2	A	1630	1658	Right-handed alpha
Helix 66	AH3	A	1661	1665	Right-handed 310
Helix 67	AH4	A	1667	1678	Right-handed alpha
Helix 68	AH5	A	1684	1692	Right-handed alpha
Helix 69	AH6	A	1699	1709	Right-handed alpha
Helix 70	AH7	A	1712	1733	Right-handed alpha
Helix 71	AH8	A	1735	1750	Right-handed alpha
Helix 72	AH9	A	1760	1775	Right-handed alpha
Helix 73	AI1	A	1801	1810	Right-handed alpha
Helix 74	AI2	A	1811	1813	Right-handed 310
Helix 75	AI3	A	1832	1844	Right-handed alpha
Helix 76	AI4	A	1858	1862	Right-handed 310
Helix 77	AI5	A	1863	1881	Right-handed alpha
Helix 78	AI6	A	1899	1905	Right-handed alpha
Helix 79	AI7	A	1917	1929	Right-handed alpha
Helix 80	AI8	A	1937	1941	Right-handed 310
Helix 81	AI9	A	1959	1974	Right-handed alpha
Helix 82	AJ1	A	1993	2002	Right-handed alpha
Helix 83	AJ2	A	2003	2005	Right-handed 310
Helix 84	AJ3	A	2027	2037	Right-handed alpha
Helix 85	AJ4	A	2081	2086	Right-handed alpha
Helix 86	AJ5	A	2095	2099	Right-handed 310
Helix 87	AJ6	A	2116	2121	Right-handed alpha
Helix 88	AJ7	A	2122	2137	Right-handed alpha
Helix 89	AJ8	A	2154	2167	Right-handed alpha
Helix 90	AJ9	A	2172	2193	Right-handed alpha
Helix 91	AK1	A	2194	2203	Right-handed alpha
Helix 92	AK2	A	2207	2224	Right-handed alpha
Helix 93	AK3	A	2250	2255	Right-handed alpha
Helix 94	AK4	A	2308	2319	Right-handed alpha
Helix 95	AK5	A	2325	2329	Right-handed 310
Helix 96	AK6	A	2330	2342	Right-handed alpha
Helix 97	AK7	A	2357	2374	Right-handed alpha
Helix 98	AK8	A	2387	2400	Right-handed alpha
Helix 99	AK9	A	2417	2440	Right-handed alpha
Helix 100	AL1	A	2455	2464	Right-handed alpha
Helix 101	AL2	A	2492	2501	Right-handed alpha
Helix 102	AL3	A	2509	2513	Right-handed 310
Helix 103	AL4	A	2521	2525	Right-handed 310
Helix 104	AL5	A	2550	2562	Right-handed alpha
Helix 105	AL6	A	2571	2589	Right-handed alpha
Helix 106	AL7	A	2601	2615	Right-handed alpha
Helix 107	AL8	A	2615	2631	Right-handed alpha
Helix 108	AL9	A	2632	2636	Right-handed 310
Helix 109	AM1	A	2642	2654	Right-handed alpha
Helix 110	AM2	A	2660	2669	Right-handed alpha
Helix 111	AM3	A	2673	2677	Right-handed 310
Helix 112	AM4	A	2678	2697	Right-handed alpha
Helix 113	AM5	A	2706	2723	Right-handed alpha
Helix 114	AM6	A	2735	2747	Right-handed alpha
Helix 115	AM7	A	2754	2760	Right-handed alpha
Helix 116	AM8	A	2775	2790	Right-handed alpha
Helix 117	AM9	A	2806	2813	Right-handed 310
Helix 118	AN1	A	2816	2819	Right-handed 310
Helix 119	AN2	A	2820	2828	Right-handed alpha
Helix 120	AN3	A	2853	2858	Right-handed 310
Helix 121	AN4	A	2867	2879	Right-handed alpha
Helix 122	AN5	A	2882	2890	Right-handed alpha
Helix 123	AN6	A	2892	2907	Right-handed alpha
Helix 124	AN7	A	2913	2932	Right-handed alpha
Helix 125	AN8	A	2936	2948	Right-handed alpha
Helix 126	AN9	A	2955	2964	Right-handed alpha
Helix 127	AO1	A	2974	2984	Right-handed alpha
Helix 128	AO2	A	3010	3019	Right-handed alpha
Helix 129	AO3	A	3037	3056	Right-handed alpha
Helix 130	AO4	A	3113	3120	Right-handed alpha
Helix 131	AO5	A	3121	3127	Right-handed alpha
Helix 132	AO6	A	3140	3156	Right-handed alpha
Helix 133	AO7	A	3172	3177	Right-handed alpha
Helix 134	AO8	A	3183	3197	Right-handed alpha
Helix 135	AO9	A	3203	3219	Right-handed alpha
Helix 136	AP1	A	3222	3229	Right-handed alpha
Helix 137	AP2	A	3230	3232	Right-handed 310
Helix 138	AP3	A	3237	3248	Right-handed alpha
Helix 139	AP4	A	3254	3265	Right-handed alpha
Helix 140	AP5	A	3286	3295	Right-handed alpha
Helix 141	AP6	A	3313	3327	Right-handed alpha
Helix 142	AP7	A	3348	3365	Right-handed alpha
Helix 143	AP8	A	3413	3420	Right-handed alpha
Helix 144	AP9	A	3422	3427	Right-handed 310
Helix 145	AQ1	A	3476	3491	Right-handed alpha
Helix 146	AQ2	A	3501	3513	Right-handed alpha
Helix 147	AQ3	A	3517	3540	Right-handed alpha
Helix 148	AQ4	A	3548	3556	Right-handed alpha
Helix 149	AQ5	A	3556	3563	Right-handed alpha
Helix 150	AQ6	A	3565	3590	Right-handed alpha
Helix 151	AQ7	A	3593	3600	Right-handed alpha
Helix 152	AQ8	A	3604	3616	Right-handed alpha
Helix 153	AQ9	A	3658	3676	Right-handed alpha
Helix 154	AR1	A	3680	3692	Right-handed alpha
Helix 155	AR2	A	3692	3700	Right-handed alpha
Helix 156	AR3	A	3702	3722	Right-handed alpha
Helix 157	AR4	A	3727	3745	Right-handed alpha
Helix 158	AR5	A	3761	3785	Right-handed alpha
Helix 159	AR6	A	3787	3800	Right-handed alpha
Helix 160	AR7	A	3807	3823	Right-handed alpha
Helix 161	AR8	A	3828	3839	Right-handed alpha
Helix 162	AR9	A	3839	3847	Right-handed alpha
Helix 163	AS1	A	3856	3890	Right-handed alpha
Helix 164	AS2	A	3894	3908	Right-handed alpha
Helix 165	AS3	A	3917	3940	Right-handed alpha
Helix 166	AS4	A	3967	3975	Right-handed alpha
Helix 167	AS5	A	4000	4026	Right-handed alpha
Helix 168	AS6	A	4027	4029	Right-handed 310
Helix 169	AS7	A	4035	4045	Right-handed alpha
Helix 170	AS8	A	4082	4090	Right-handed alpha
Helix 171	AS9	A	4092	4095	Right-handed 310
Helix 172	AT1	A	4096	4111	Right-handed alpha
Helix 173	AT2	A	4116	4139	Right-handed alpha
Helix 174	AT3	A	4142	4156	Right-handed alpha
Helix 175	AT4	A	4171	4198	Right-handed alpha
Helix 176	AT5	A	4204	4219	Right-handed alpha
Helix 177	AT6	A	4221	4236	Right-handed alpha
Helix 178	AT7	A	4237	4245	Right-handed alpha
Helix 179	AT8	A	4251	4255	Right-handed 310
Helix 180	AT9	A	4257	4262	Right-handed alpha
Helix 181	AU1	A	4279	4293	Right-handed alpha
Helix 182	AU2	A	4296	4305	Right-handed alpha
Helix 183	AU3	A	4309	4331	Right-handed alpha
Helix 184	AU4	A	4342	4353	Right-handed alpha
Helix 185	AU5	A	4358	4370	Right-handed alpha
Helix 186	AU6	A	4385	4403	Right-handed alpha
Helix 187	AU7	A	4407	4417	Right-handed alpha
Helix 188	AU8	A	4522	4542	Right-handed alpha
Helix 189	AU9	A	4544	4552	Right-handed alpha
Helix 190	AV1	A	4558	4576	Right-handed alpha
Helix 191	AV2	A	4581	4596	Right-handed alpha
Helix 192	AV3	A	4597	4599	Right-handed 310
Helix 193	AV4	A	4613	4633	Right-handed alpha
Helix 194	AV5	A	4638	4648	Right-handed alpha
Helix 195	AV6	A	4665	4669	Right-handed 310
Helix 196	AV7	A	4691	4702	Right-handed alpha
Helix 197	AV8	A	4708	4717	Right-handed alpha
Helix 198	AV9	A	4717	4722	Right-handed alpha
Helix 199	AW1	A	4723	4725	Right-handed 310
Helix 200	AW2	A	4726	4741	Right-handed alpha
Helix 201	AW3	A	4751	4758	Right-handed alpha
Helix 202	AW4	A	4761	4783	Right-handed alpha
Helix 203	AW5	A	4809	4813	Right-handed 310
Helix 204	AW6	A	4820	4845	Right-handed alpha
Helix 205	AW7	A	4871	4878	Right-handed alpha
Helix 206	AW8	A	4895	4905	Right-handed alpha
Helix 207	AW9	A	4930	4941	Right-handed alpha
Helix 208	AX1	A	4947	4958	Right-handed alpha
Helix 209	AX2	A	4961	4980	Right-handed alpha
Helix 210	AX3	A	4988	4996	Right-handed alpha
Helix 211	AX4	A	5003	5011	Right-handed alpha
Helix 212	AX5	A	5012	5013	Right-handed 310
Helix 213	AX6	A	5014	5016	Right-handed 310
Helix 214	AX7	A	5017	5036	Right-handed alpha
Helix 215	AX8	A	5045	5049	Right-handed 310
Helix 216	AX9	A	5053	5066	Right-handed alpha
Helix 217	AY1	A	5068	5084	Right-handed alpha
Helix 218	AY2	A	5099	5108	Right-handed alpha
Helix 219	AY3	A	5116	5121	Right-handed alpha
Helix 220	AY4	A	5131	5149	Right-handed alpha

There are 20 sheets in PDB entry 9I1I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	433	434	first strand
Strand 2	A	416	422	anti-parallel
Strand 3	A	369	373	anti-parallel
Strand 4	A	384	393	anti-parallel
Strand 5	A	398	408	anti-parallel
Strand 6	A	347	357	anti-parallel
Strand 7	A	463	471	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	433	434	first strand
Strand 2	A	416	422	anti-parallel
Strand 3	A	449	452	anti-parallel
Strand 4	A	539	541	anti-parallel
Strand 5	A	545	547	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1148	1151	first strand
Strand 2	A	1230	1233	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1541	1543	first strand
Strand 2	A	1526	1530	anti-parallel
Strand 3	A	1508	1511	anti-parallel
Strand 4	A	1602	1606	anti-parallel
Strand 5	A	1613	1616	anti-parallel
Strand 6	A	1625	1626	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1793	1796	first strand
Strand 2	A	1887	1892	parallel
Strand 3	A	1853	1857	parallel
Strand 4	A	1824	1826	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2057	2062	first strand
Strand 2	A	1948	1953	parallel
Strand 3	A	2090	2092	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1984	1987	first strand
Strand 2	A	2017	2020	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2040	2041	first strand
Strand 2	A	2049	2050	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2266	2269	first strand
Strand 2	A	2276	2279	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2282	2285	first strand
Strand 2	A	2291	2294	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2377	2380	first strand
Strand 2	A	2480	2485	parallel
Strand 3	A	2444	2448	parallel
Strand 4	A	2407	2411	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2467	2468	first strand
Strand 2	A	2471	2472	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2762	2763	first strand
Strand 2	A	2798	2799	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2766	2767	first strand
Strand 2	A	2801	2803	parallel
Strand 3	A	2841	2843	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3026	3027	first strand
Strand 2	A	3059	3061	parallel
Strand 3	A	3107	3112	parallel
Strand 4	A	3001	3006	parallel
Strand 5	A	3128	3132	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3086	3091	first strand
Strand 2	A	3096	3101	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3304	3307	first strand
Strand 2	A	3332	3339	parallel
Strand 3	A	3371	3378	parallel
Strand 4	A	3272	3279	parallel
Strand 5	A	3397	3401	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3958	3959	first strand
Strand 2	A	3965	3966	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4852	4853	first strand
Strand 2	A	4913	4914	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4881	4883	first strand
Strand 2	A	4891	4893	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9I1I

Analysis of interatomic Contacts of Structural Units in PDB entry:
9I1I