Analysis of interatomic Contacts of Structural Units in PDB entry:
9I5M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9I5M entry

There are 2 chains in PDB entry 9I5M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 5LEU 232
B
 THR 5LYS 229
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 9I5M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 40Right-handed 310
Helix 2
AA2
A
41 56Right-handed alpha
Helix 3
AA3
A
66 73Right-handed 310
Helix 4
AA4
A
77 101Right-handed alpha
Helix 5
AA5
A
112 117Right-handed alpha
Helix 6
AA6
A
120 135Right-handed alpha
Helix 7
AA7
A
135 157Right-handed alpha
Helix 8
AA8
A
161 181Right-handed alpha
Helix 9
AA9
A
181 187Right-handed alpha
Helix 10
AB1
A
199 210Right-handed alpha
Helix 11
AB2
B
18 22Right-handed 310
Helix 12
AB3
B
37 40Right-handed 310
Helix 13
AB4
B
41 56Right-handed alpha
Helix 14
AB5
B
66 73Right-handed 310
Helix 15
AB6
B
77 101Right-handed alpha
Helix 16
AB7
B
112 117Right-handed alpha
Helix 17
AB8
B
120 135Right-handed alpha
Helix 18
AB9
B
135 157Right-handed alpha
Helix 19
AC1
B
161 181Right-handed alpha
Helix 20
AC2
B
181 187Right-handed alpha
Helix 21
AC3
B
199 210Right-handed alpha
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There are 3 sheets in PDB entry 9I5M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 15first strand
Strand 2
A
219 227anti-parallel
Strand 3
A
191 194parallel
Strand 4
A
28 33parallel
Strand 5
A
59 64parallel
Strand 6
A
107 111parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 15first strand
Strand 2
B
223 227anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
107 111first strand
Strand 2
B
59 64parallel
Strand 3
B
28 33parallel
Strand 4
B
191 193parallel
Strand 5
B
219 221parallel
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