Analysis of interatomic Contacts of Structural Units in PDB entry:
9I5R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9I5R entry

There are 2 chains in PDB entry 9I5R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 1ALA 421
B
 ASP 3ASP 17
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 18 helices in PDB entry 9I5R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 48Right-handed alpha
Helix 2
AA2
A
49 62Right-handed alpha
Helix 3
AA3
A
107 154Right-handed alpha
Helix 4
AA4
A
194 205Right-handed alpha
Helix 5
AA5
A
206 212Right-handed alpha
Helix 6
AA6
A
212 230Right-handed alpha
Helix 7
AA7
A
239 259Right-handed alpha
Helix 8
AA8
A
275 282Right-handed alpha
Helix 9
AA9
A
284 286Right-handed 310
Helix 10
AB1
A
287 296Right-handed alpha
Helix 11
AB2
A
297 306Right-handed alpha
Helix 12
AB3
A
307 326Right-handed alpha
Helix 13
AB4
A
327 357Right-handed alpha
Helix 14
AB5
A
375 390Right-handed alpha
Helix 15
AB6
A
396 404Right-handed alpha
Helix 16
AB7
A
405 417Right-handed alpha
Helix 17
AB8
B
4 10Right-handed alpha
Helix 18
AB9
B
11 17Right-handed 310
Back to top of page

There is 1 sheet (AA1) in PDB entry 9I5R.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 238first strand
Strand 2
A
373 374anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il