Analysis of interatomic Contacts of Structural Units in PDB entry:
9I7U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9I7U entry

There are 14 chains in PDB entry 9I7U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 2SER 513
B
 MET 1GLY 222
C
 THR 2SER 261
D
 GLU 31LYS 169
E
 GLN 46VAL 150
F
 ALA 32HIS 129
G
 SER 34ASP 108
H
 MET 5ILE 86
I
 GLU 4LYS 75
J
 PHE 24LYS 80
K
 GLN 27ASN 79
L
 SER 17THR 63
M
 ILE 26PRO 68
N
 MET 1PHE 81
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 9I7U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 42Right-handed alpha
Helix 2
AA2
A
50 69Right-handed alpha
Helix 3
AA3
A
69 75Right-handed alpha
Helix 4
AA4
A
75 88Right-handed alpha
Helix 5
AA5
A
96 118Right-handed alpha
Helix 6
AA6
A
141 171Right-handed alpha
Helix 7
AA7
A
182 215Right-handed alpha
Helix 8
AA8
A
221 225Right-handed 310
Helix 9
AA9
A
227 262Right-handed alpha
Helix 10
AB1
A
269 287Right-handed alpha
Helix 11
AB2
A
288 292Right-handed 310
Helix 12
AB3
A
298 312Right-handed alpha
Helix 13
AB4
A
312 327Right-handed alpha
Helix 14
AB5
A
335 360Right-handed alpha
Helix 15
AB6
A
363 368Right-handed alpha
Helix 16
AB7
A
370 402Right-handed alpha
Helix 17
AB8
A
406 435Right-handed alpha
Helix 18
AB9
A
444 446Right-handed 310
Helix 19
AC1
A
447 479Right-handed alpha
Helix 20
AC2
A
487 495Right-handed 310
Helix 21
AC3
B
14 47Right-handed alpha
Helix 22
AC4
B
58 89Right-handed alpha
Helix 23
AC5
B
215 222Right-handed alpha
Helix 24
AC6
C
15 38Right-handed alpha
Helix 25
AC7
C
40 66Right-handed alpha
Helix 26
AC8
C
72 107Right-handed alpha
Helix 27
AC9
C
109 113Right-handed 310
Helix 28
AD1
C
128 153Right-handed alpha
Helix 29
AD2
C
155 184Right-handed alpha
Helix 30
AD3
C
192 224Right-handed alpha
Helix 31
AD4
C
232 257Right-handed alpha
Helix 32
AD5
D
56 68Right-handed alpha
Helix 33
AD6
D
74 86Right-handed alpha
Helix 34
AD7
D
89 94Right-handed alpha
Helix 35
AD8
D
98 125Right-handed alpha
Helix 36
AD9
D
130 133Right-handed 310
Helix 37
AE1
D
134 148Right-handed alpha
Helix 38
AE2
D
155 159Right-handed 310
Helix 39
AE3
E
50 62Right-handed alpha
Helix 40
AE4
E
66 80Right-handed alpha
Helix 41
AE5
E
85 100Right-handed alpha
Helix 42
AE6
E
102 117Right-handed alpha
Helix 43
AE7
E
122 129Right-handed alpha
Helix 44
AE8
E
130 136Right-handed alpha
Helix 45
AE9
F
39 44Right-handed alpha
Helix 46
AF1
F
46 57Right-handed alpha
Helix 47
AF2
G
35 62Right-handed alpha
Helix 48
AF3
H
26 48Right-handed alpha
Helix 49
AF4
H
54 56Right-handed 310
Helix 50
AF5
H
57 62Right-handed alpha
Helix 51
AF6
H
66 79Right-handed alpha
Helix 52
AF7
I
13 55Right-handed alpha
Helix 53
AF8
I
57 68Right-handed alpha
Helix 54
AF9
J
27 36Right-handed alpha
Helix 55
AG1
J
42 46Right-handed 310
Helix 56
AG2
J
48 77Right-handed alpha
Helix 57
AG3
K
32 60Right-handed alpha
Helix 58
AG4
L
33 62Right-handed alpha
Helix 59
AG5
M
36 61Right-handed alpha
Helix 60
AG6
M
61 66Right-handed alpha
Helix 61
AG7
N
2 12Right-handed alpha
Helix 62
AG8
N
14 39Right-handed alpha
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There are 5 sheets in PDB entry 9I7U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
116 120first strand
Strand 2
B
105 110anti-parallel
Strand 3
B
95 102anti-parallel
Strand 4
B
150 156parallel
Strand 5
B
180 184anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 144first strand
Strand 2
B
208 213parallel
Strand 3
B
190 195anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
161 165first strand
Strand 2
B
170 174anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
78 82first strand
Strand 2
F
117 124parallel
Strand 3
F
111 113anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
86 91first strand
Strand 2
F
101 106anti-parallel
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