Analysis of interatomic Contacts of Structural Units in PDB entry:
9I7V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9I7V entry

There are 3 chains in PDB entry 9I7V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 38GLN 485
B
 LYS 38GLN 485
C
 LYS 38GLN 485
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 69 helices in PDB entry 9I7V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 48Right-handed alpha
Helix 2
AA2
A
49 69Right-handed alpha
Helix 3
AA3
A
74 82Right-handed alpha
Helix 4
AA4
A
82 94Right-handed alpha
Helix 5
AA5
A
95 110Right-handed alpha
Helix 6
AA6
A
112 146Right-handed alpha
Helix 7
AA7
A
171 184Right-handed alpha
Helix 8
AA8
A
222 241Right-handed alpha
Helix 9
AA9
A
242 244Right-handed 310
Helix 10
AB1
A
246 283Right-handed alpha
Helix 11
AB2
A
292 311Right-handed alpha
Helix 12
AB3
A
311 322Right-handed alpha
Helix 13
AB4
A
324 331Right-handed alpha
Helix 14
AB5
A
332 343Right-handed alpha
Helix 15
AB6
A
348 359Right-handed alpha
Helix 16
AB7
A
363 368Right-handed alpha
Helix 17
AB8
A
370 375Right-handed alpha
Helix 18
AB9
A
379 397Right-handed alpha
Helix 19
AC1
A
402 418Right-handed alpha
Helix 20
AC2
A
430 438Right-handed alpha
Helix 21
AC3
A
442 448Right-handed 310
Helix 22
AC4
A
451 477Right-handed alpha
Helix 23
AC5
A
479 484Right-handed alpha
Helix 24
AC6
B
39 48Right-handed alpha
Helix 25
AC7
B
49 69Right-handed alpha
Helix 26
AC8
B
74 82Right-handed alpha
Helix 27
AC9
B
82 94Right-handed alpha
Helix 28
AD1
B
95 110Right-handed alpha
Helix 29
AD2
B
112 146Right-handed alpha
Helix 30
AD3
B
171 184Right-handed alpha
Helix 31
AD4
B
222 241Right-handed alpha
Helix 32
AD5
B
242 244Right-handed 310
Helix 33
AD6
B
246 283Right-handed alpha
Helix 34
AD7
B
292 311Right-handed alpha
Helix 35
AD8
B
311 322Right-handed alpha
Helix 36
AD9
B
324 331Right-handed alpha
Helix 37
AE1
B
332 343Right-handed alpha
Helix 38
AE2
B
348 359Right-handed alpha
Helix 39
AE3
B
363 368Right-handed alpha
Helix 40
AE4
B
370 375Right-handed alpha
Helix 41
AE5
B
379 397Right-handed alpha
Helix 42
AE6
B
402 418Right-handed alpha
Helix 43
AE7
B
430 438Right-handed alpha
Helix 44
AE8
B
442 448Right-handed 310
Helix 45
AE9
B
451 477Right-handed alpha
Helix 46
AF1
B
479 484Right-handed alpha
Helix 47
AF2
C
39 48Right-handed alpha
Helix 48
AF3
C
49 69Right-handed alpha
Helix 49
AF4
C
74 82Right-handed alpha
Helix 50
AF5
C
82 94Right-handed alpha
Helix 51
AF6
C
95 110Right-handed alpha
Helix 52
AF7
C
112 146Right-handed alpha
Helix 53
AF8
C
171 184Right-handed alpha
Helix 54
AF9
C
222 241Right-handed alpha
Helix 55
AG1
C
242 244Right-handed 310
Helix 56
AG2
C
246 283Right-handed alpha
Helix 57
AG3
C
292 311Right-handed alpha
Helix 58
AG4
C
311 322Right-handed alpha
Helix 59
AG5
C
324 331Right-handed alpha
Helix 60
AG6
C
332 343Right-handed alpha
Helix 61
AG7
C
348 359Right-handed alpha
Helix 62
AG8
C
363 368Right-handed alpha
Helix 63
AG9
C
370 375Right-handed alpha
Helix 64
AH1
C
379 397Right-handed alpha
Helix 65
AH2
C
402 418Right-handed alpha
Helix 66
AH3
C
430 438Right-handed alpha
Helix 67
AH4
C
442 448Right-handed 310
Helix 68
AH5
C
451 477Right-handed alpha
Helix 69
AH6
C
479 484Right-handed alpha
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There are 3 sheets in PDB entry 9I7V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 200first strand
Strand 2
A
213 219anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
194 200first strand
Strand 2
B
213 219anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
194 200first strand
Strand 2
C
213 219anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il