Analysis of interatomic Contacts of Structural Units in PDB entry:
9IC1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9IC1 entry

There are 5 chains in PDB entry 9IC1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 68LYS 1233
B
 GLU 41ASN 458
C
 ALA 42VAL 459
P
 G 8 T 25
T
 C 14 C 33
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 74 helices in PDB entry 9IC1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
80 88Right-handed alpha
Helix 2
AA2
A
96 110Right-handed alpha
Helix 3
AA3
A
134 159Right-handed alpha
Helix 4
AA4
A
180 182Right-handed 310
Helix 5
AA5
A
225 230Right-handed alpha
Helix 6
AA6
A
240 244Right-handed 310
Helix 7
AA7
A
270 277Right-handed alpha
Helix 8
AA8
A
278 283Right-handed 310
Helix 9
AA9
A
294 303Right-handed alpha
Helix 10
AB1
A
305 316Right-handed alpha
Helix 11
AB2
A
345 351Right-handed 310
Helix 12
AB3
A
355 364Right-handed alpha
Helix 13
AB4
A
381 388Right-handed alpha
Helix 14
AB5
A
388 418Right-handed alpha
Helix 15
AB6
A
420 431Right-handed alpha
Helix 16
AB7
A
439 471Right-handed alpha
Helix 17
AB8
A
472 475Right-handed 310
Helix 18
AB9
A
477 482Right-handed 310
Helix 19
AC1
A
534 554Right-handed alpha
Helix 20
AC2
A
570 577Right-handed alpha
Helix 21
AC3
A
598 603Right-handed alpha
Helix 22
AC4
A
767 769Right-handed 310
Helix 23
AC5
A
770 776Right-handed alpha
Helix 24
AC6
A
786 810Right-handed alpha
Helix 25
AC7
A
822 828Right-handed alpha
Helix 26
AC8
A
858 862Right-handed 310
Helix 27
AC9
A
871 878Right-handed 310
Helix 28
AD1
A
893 908Right-handed alpha
Helix 29
AD2
A
914 922Right-handed alpha
Helix 30
AD3
A
930 940Right-handed alpha
Helix 31
AD4
A
942 955Right-handed alpha
Helix 32
AD5
A
957 970Right-handed alpha
Helix 33
AD6
A
979 988Right-handed alpha
Helix 34
AD7
A
1054 1066Right-handed alpha
Helix 35
AD8
A
1092 1123Right-handed alpha
Helix 36
AD9
A
1145 1168Right-handed alpha
Helix 37
AE1
A
1204 1209Right-handed alpha
Helix 38
AE2
A
1219 1228Right-handed alpha
Helix 39
AE3
B
42 50Right-handed alpha
Helix 40
AE4
B
56 60Right-handed 310
Helix 41
AE5
B
61 68Right-handed alpha
Helix 42
AE6
B
74 93Right-handed alpha
Helix 43
AE7
B
123 128Right-handed alpha
Helix 44
AE8
B
146 152Right-handed alpha
Helix 45
AE9
B
159 166Right-handed alpha
Helix 46
AF1
B
166 174Right-handed alpha
Helix 47
AF2
B
218 220Right-handed 310
Helix 48
AF3
B
221 240Right-handed alpha
Helix 49
AF4
B
243 245Right-handed 310
Helix 50
AF5
B
282 289Right-handed alpha
Helix 51
AF6
B
292 296Right-handed 310
Helix 52
AF7
B
316 328Right-handed alpha
Helix 53
AF8
B
365 383Right-handed alpha
Helix 54
AF9
B
398 409Right-handed alpha
Helix 55
AG1
B
420 425Right-handed alpha
Helix 56
AG2
B
444 458Right-handed alpha
Helix 57
AG3
C
43 50Right-handed alpha
Helix 58
AG4
C
57 60Right-handed 310
Helix 59
AG5
C
61 68Right-handed alpha
Helix 60
AG6
C
74 94Right-handed alpha
Helix 61
AG7
C
123 131Right-handed alpha
Helix 62
AG8
C
142 152Right-handed alpha
Helix 63
AG9
C
159 166Right-handed alpha
Helix 64
AH1
C
166 174Right-handed alpha
Helix 65
AH2
C
221 240Right-handed alpha
Helix 66
AH3
C
243 245Right-handed 310
Helix 67
AH4
C
282 289Right-handed alpha
Helix 68
AH5
C
292 296Right-handed 310
Helix 69
AH6
C
316 327Right-handed alpha
Helix 70
AH7
C
365 382Right-handed alpha
Helix 71
AH8
C
391 393Right-handed 310
Helix 72
AH9
C
398 409Right-handed alpha
Helix 73
AI1
C
418 425Right-handed alpha
Helix 74
AI2
C
443 459Right-handed alpha
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There are 13 sheets in PDB entry 9IC1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
184 187first strand
Strand 2
A
174 178anti-parallel
Strand 3
A
219 224anti-parallel
Strand 4
A
209 216anti-parallel
Strand 5
A
194 201anti-parallel
Strand 6
A
265 268parallel
Strand 7
A
290 293parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
435 438first strand
Strand 2
A
837 840anti-parallel
Strand 3
A
814 816anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
747 751first strand
Strand 2
A
619 625anti-parallel
Strand 3
A
610 615anti-parallel
Strand 4
A
606 607anti-parallel
Strand 5
A
779 780anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1127 1131first strand
Strand 2
A
1136 1142anti-parallel
Strand 3
A
884 890anti-parallel
Strand 4
A
1183 1186anti-parallel
Strand 5
A
1216 1218anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
99 101first strand
Strand 2
B
180 190parallel
Strand 3
B
206 217anti-parallel
Strand 4
B
308 315anti-parallel
Strand 5
B
270 279anti-parallel
Strand 6
B
260 267anti-parallel
Strand 7
B
247 251anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
107 108first strand
Strand 2
B
154 155anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
120 122first strand
Strand 2
C
120 122anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
298 300first strand
Strand 2
B
303 305anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
387 389first strand
Strand 2
B
357 359parallel
Strand 3
B
413 416parallel
Strand 4
B
426 431anti-parallel
Strand 5
B
437 441anti-parallel
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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
99 101first strand
Strand 2
C
180 190parallel
Strand 3
C
206 217anti-parallel
Strand 4
C
308 315anti-parallel
Strand 5
C
271 281anti-parallel
Strand 6
C
259 266anti-parallel
Strand 7
C
247 253anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
107 108first strand
Strand 2
C
154 155anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
298 300first strand
Strand 2
C
303 305anti-parallel
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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
387 389first strand
Strand 2
C
357 359parallel
Strand 3
C
413 416parallel
Strand 4
C
426 431anti-parallel
Strand 5
C
437 441anti-parallel
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