Analysis of interatomic Contacts of Structural Units in PDB entry:
9IH8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9IH8 entry

There are 3 chains in PDB entry 9IH8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 103	ILE 720
B	ASN 103	ILE 720
C	ASN 103	ILE 720

There are 47 helices in PDB entry 9IH8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	188	195	Right-handed alpha
Helix 2	AA2	A	195	200	Right-handed alpha
Helix 3	AA3	A	220	222	Right-handed 310
Helix 4	AA4	A	301	305	Right-handed 310
Helix 5	AA5	A	310	312	Right-handed 310
Helix 6	AA6	A	353	358	Right-handed alpha
Helix 7	AA7	A	398	402	Right-handed 310
Helix 8	AA8	A	405	424	Right-handed alpha
Helix 9	AA9	A	454	456	Right-handed 310
Helix 10	AB1	A	498	543	Right-handed alpha
Helix 11	AB2	A	543	553	Right-handed alpha
Helix 12	AB3	A	574	576	Right-handed 310
Helix 13	AB4	A	659	661	Right-handed 310
Helix 14	AB5	A	687	694	Right-handed alpha
Helix 15	AB6	A	698	708	Right-handed alpha
Helix 16	AB7	A	708	714	Right-handed alpha
Helix 17	AB8	B	188	195	Right-handed alpha
Helix 18	AB9	B	195	200	Right-handed alpha
Helix 19	AC1	B	220	222	Right-handed 310
Helix 20	AC2	B	301	305	Right-handed 310
Helix 21	AC3	B	310	312	Right-handed 310
Helix 22	AC4	B	353	358	Right-handed alpha
Helix 23	AC5	B	398	402	Right-handed 310
Helix 24	AC6	B	405	424	Right-handed alpha
Helix 25	AC7	B	454	456	Right-handed 310
Helix 26	AC8	B	498	543	Right-handed alpha
Helix 27	AC9	B	543	553	Right-handed alpha
Helix 28	AD1	B	574	576	Right-handed 310
Helix 29	AD2	B	659	661	Right-handed 310
Helix 30	AD3	B	687	694	Right-handed alpha
Helix 31	AD4	B	698	708	Right-handed alpha
Helix 32	AD5	B	708	714	Right-handed alpha
Helix 33	AD6	C	188	195	Right-handed alpha
Helix 34	AD7	C	195	200	Right-handed alpha
Helix 35	AD8	C	220	222	Right-handed 310
Helix 36	AD9	C	301	305	Right-handed 310
Helix 37	AE1	C	310	312	Right-handed 310
Helix 38	AE2	C	353	358	Right-handed alpha
Helix 39	AE3	C	398	402	Right-handed 310
Helix 40	AE4	C	405	424	Right-handed alpha
Helix 41	AE5	C	498	543	Right-handed alpha
Helix 42	AE6	C	543	553	Right-handed alpha
Helix 43	AE7	C	574	576	Right-handed 310
Helix 44	AE8	C	659	661	Right-handed 310
Helix 45	AE9	C	687	694	Right-handed alpha
Helix 46	AF1	C	698	708	Right-handed alpha
Helix 47	AF2	C	708	714	Right-handed alpha

There are 32 sheets in PDB entry 9IH8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	110	first strand
Strand 2	A	571	573	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	556	560	first strand
Strand 2	A	565	569	anti-parallel
Strand 3	A	119	122	anti-parallel
Strand 4	C	662	664	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	361	367	first strand
Strand 2	A	140	147	anti-parallel
Strand 3	A	443	452	anti-parallel
Strand 4	A	428	430	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	361	367	first strand
Strand 2	A	140	147	anti-parallel
Strand 3	A	443	452	anti-parallel
Strand 4	A	435	439	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	174	186	first strand
Strand 2	A	152	171	anti-parallel
Strand 3	A	258	275	anti-parallel
Strand 4	A	282	284	anti-parallel
Strand 5	A	289	290	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	230	231	first strand
Strand 2	A	241	243	anti-parallel
Strand 3	A	258	275	anti-parallel
Strand 4	A	152	171	anti-parallel
Strand 5	A	346	350	anti-parallel
Strand 6	A	335	341	anti-parallel
Strand 7	A	314	320	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	201	203	first strand
Strand 2	A	226	228	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	205	210	first strand
Strand 2	A	213	218	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	370	375	first strand
Strand 2	A	378	383	anti-parallel
Strand 3	A	388	393	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	578	580	first strand
Strand 2	A	598	601	anti-parallel
Strand 3	A	610	614	anti-parallel
Strand 4	A	620	621	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	592	594	first strand
Strand 2	A	627	629	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	635	640	first strand
Strand 2	A	643	648	anti-parallel
Strand 3	A	651	657	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	662	664	first strand
Strand 2	B	119	122	parallel
Strand 3	B	565	569	anti-parallel
Strand 4	B	556	560	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	571	573	first strand
Strand 2	B	108	110	anti-parallel
Strand 3	B	619	621	parallel
Strand 4	B	610	614	anti-parallel
Strand 5	B	598	601	anti-parallel
Strand 6	B	578	580	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	388	392	first strand
Strand 2	B	378	383	anti-parallel
Strand 3	B	361	375	anti-parallel
Strand 4	B	138	147	anti-parallel
Strand 5	B	443	452	anti-parallel
Strand 6	B	428	430	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	388	392	first strand
Strand 2	B	378	383	anti-parallel
Strand 3	B	361	375	anti-parallel
Strand 4	B	138	147	anti-parallel
Strand 5	B	443	452	anti-parallel
Strand 6	B	435	439	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	174	186	first strand
Strand 2	B	152	171	anti-parallel
Strand 3	B	258	275	anti-parallel
Strand 4	B	282	284	anti-parallel
Strand 5	B	289	290	anti-parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	230	231	first strand
Strand 2	B	241	243	anti-parallel
Strand 3	B	258	275	anti-parallel
Strand 4	B	152	171	anti-parallel
Strand 5	B	346	350	anti-parallel
Strand 6	B	335	341	anti-parallel
Strand 7	B	314	320	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	201	203	first strand
Strand 2	B	226	228	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	205	210	first strand
Strand 2	B	213	218	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	592	594	first strand
Strand 2	B	627	629	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	635	640	first strand
Strand 2	B	643	648	anti-parallel
Strand 3	B	651	657	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	662	664	first strand
Strand 2	C	119	122	parallel
Strand 3	C	565	569	anti-parallel
Strand 4	C	556	560	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	108	110	first strand
Strand 2	C	571	573	anti-parallel

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There are 8 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	428	430	first strand
Strand 2	C	443	452	anti-parallel
Strand 3	C	435	439	anti-parallel
Strand 4	C	388	393	anti-parallel
Strand 5	C	378	383	anti-parallel
Strand 6	C	361	375	anti-parallel
Strand 7	C	138	147	anti-parallel
Strand 8	C	443	452	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	174	186	first strand
Strand 2	C	152	171	anti-parallel
Strand 3	C	258	275	anti-parallel
Strand 4	C	282	284	anti-parallel
Strand 5	C	289	290	anti-parallel

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There are 7 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	230	231	first strand
Strand 2	C	241	243	anti-parallel
Strand 3	C	258	275	anti-parallel
Strand 4	C	152	171	anti-parallel
Strand 5	C	346	350	anti-parallel
Strand 6	C	335	341	anti-parallel
Strand 7	C	314	320	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	201	203	first strand
Strand 2	C	226	228	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	205	210	first strand
Strand 2	C	213	218	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	578	580	first strand
Strand 2	C	598	601	anti-parallel
Strand 3	C	610	614	anti-parallel
Strand 4	C	620	621	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	592	594	first strand
Strand 2	C	627	629	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	635	640	first strand
Strand 2	C	643	648	anti-parallel
Strand 3	C	651	657	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9IH8

Analysis of interatomic Contacts of Structural Units in PDB entry:
9IH8