Analysis of interatomic Contacts of Structural Units in PDB entry:
9IHV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9IHV entry

There are 2 chains in PDB entry 9IHV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2GLU 477
B
 LYS 2GLU 477
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 9IHV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 37Right-handed alpha
Helix 2
AA2
A
39 48Right-handed alpha
Helix 3
AA3
A
57 69Right-handed alpha
Helix 4
AA4
A
75 82Right-handed alpha
Helix 5
AA5
A
83 87Right-handed 310
Helix 6
AA6
A
88 103Right-handed alpha
Helix 7
AA7
A
105 109Right-handed 310
Helix 8
AA8
A
110 119Right-handed alpha
Helix 9
AA9
A
123 138Right-handed alpha
Helix 10
AB1
A
140 147Right-handed alpha
Helix 11
AB2
A
147 154Right-handed alpha
Helix 12
AB3
A
158 175Right-handed alpha
Helix 13
AB4
A
175 186Right-handed alpha
Helix 14
AB5
A
200 206Right-handed alpha
Helix 15
AB6
A
207 213Right-handed 310
Helix 16
AB7
A
226 246Right-handed alpha
Helix 17
AB8
A
254 258Right-handed 310
Helix 18
AB9
A
260 270Right-handed alpha
Helix 19
AC1
A
278 286Right-handed alpha
Helix 20
AC2
A
307 317Right-handed alpha
Helix 21
AC3
A
318 321Right-handed 310
Helix 22
AC4
A
322 341Right-handed alpha
Helix 23
AC5
A
356 363Right-handed 310
Helix 24
AC6
A
364 376Right-handed alpha
Helix 25
AC7
A
385 392Right-handed alpha
Helix 26
AC8
A
419 435Right-handed alpha
Helix 27
AC9
A
439 445Right-handed alpha
Helix 28
AD1
A
446 453Right-handed alpha
Helix 29
AD2
A
460 475Right-handed alpha
Helix 30
AD3
B
28 37Right-handed alpha
Helix 31
AD4
B
39 44Right-handed alpha
Helix 32
AD5
B
45 47Right-handed 310
Helix 33
AD6
B
57 69Right-handed alpha
Helix 34
AD7
B
75 82Right-handed alpha
Helix 35
AD8
B
83 87Right-handed 310
Helix 36
AD9
B
88 103Right-handed alpha
Helix 37
AE1
B
105 109Right-handed 310
Helix 38
AE2
B
110 119Right-handed alpha
Helix 39
AE3
B
123 138Right-handed alpha
Helix 40
AE4
B
142 147Right-handed alpha
Helix 41
AE5
B
147 154Right-handed alpha
Helix 42
AE6
B
158 175Right-handed alpha
Helix 43
AE7
B
175 186Right-handed alpha
Helix 44
AE8
B
200 206Right-handed alpha
Helix 45
AE9
B
207 213Right-handed 310
Helix 46
AF1
B
226 246Right-handed alpha
Helix 47
AF2
B
254 258Right-handed 310
Helix 48
AF3
B
260 270Right-handed alpha
Helix 49
AF4
B
278 286Right-handed alpha
Helix 50
AF5
B
307 317Right-handed alpha
Helix 51
AF6
B
318 321Right-handed 310
Helix 52
AF7
B
322 341Right-handed alpha
Helix 53
AF8
B
356 363Right-handed 310
Helix 54
AF9
B
364 376Right-handed alpha
Helix 55
AG1
B
385 392Right-handed alpha
Helix 56
AG2
B
419 435Right-handed alpha
Helix 57
AG3
B
439 444Right-handed alpha
Helix 58
AG4
B
446 453Right-handed alpha
Helix 59
AG5
B
460 476Right-handed alpha
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There are 8 sheets in PDB entry 9IHV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 192first strand
Strand 2
A
53 56parallel
Strand 3
A
4 12parallel
Strand 4
A
346 352parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 192first strand
Strand 2
A
53 56parallel
Strand 3
A
4 12parallel
Strand 4
A
381 383parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 25first strand
Strand 2
A
73 74parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
251 252first strand
Strand 2
A
274 277parallel
Strand 3
A
301 305parallel
Strand 4
A
294 297anti-parallel
Strand 5
A
397 400parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
191 192first strand
Strand 2
B
53 56parallel
Strand 3
B
4 12parallel
Strand 4
B
346 352parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
191 192first strand
Strand 2
B
53 56parallel
Strand 3
B
4 12parallel
Strand 4
B
381 383parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 25first strand
Strand 2
B
73 74parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
251 252first strand
Strand 2
B
274 277parallel
Strand 3
B
301 305parallel
Strand 4
B
294 297anti-parallel
Strand 5
B
397 400parallel
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