Analysis of interatomic Contacts of Structural Units in PDB entry:
9IJ2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9IJ2 entry

There are 3 chains in PDB entry 9IJ2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 570LEU 971
B
 U 1 G 22
C
 C 1 A 21
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 9IJ2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
612 625Right-handed alpha
Helix 2
AA2
A
646 652Right-handed alpha
Helix 3
AA3
A
675 688Right-handed alpha
Helix 4
AA4
A
699 703Right-handed alpha
Helix 5
AA5
A
707 723Right-handed alpha
Helix 6
AA6
A
781 802Right-handed alpha
Helix 7
AA7
A
819 825Right-handed alpha
Helix 8
AA8
A
826 833Right-handed alpha
Helix 9
AA9
A
834 837Right-handed 310
Helix 10
AB1
A
914 926Right-handed alpha
Helix 11
AB2
A
939 953Right-handed alpha
Helix 12
AB3
A
963 967Right-handed 310
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There are 2 sheets in PDB entry 9IJ2. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
639 641first strand
Strand 2
A
604 608parallel
Strand 3
A
666 671parallel
Strand 4
A
695 698parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
769 774first strand
Strand 2
A
755 761anti-parallel
Strand 3
A
737 745anti-parallel
Strand 4
A
807 813parallel
Strand 5
A
844 849parallel
Strand 6
A
905 909anti-parallel
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