Analysis of interatomic Contacts of Structural Units in PDB entry:
9IJY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9IJY entry

There are 2 chains in PDB entry 9IJY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 229ASP 628
B
 ALA 229ASP 628
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 9IJY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
230 257Right-handed alpha
Helix 2
AA2
A
265 294Right-handed alpha
Helix 3
AA3
A
298 303Right-handed alpha
Helix 4
AA4
A
312 336Right-handed alpha
Helix 5
AA5
A
345 361Right-handed alpha
Helix 6
AA6
A
367 383Right-handed alpha
Helix 7
AA7
A
390 403Right-handed alpha
Helix 8
AA8
A
403 419Right-handed alpha
Helix 9
AA9
A
438 442Right-handed 310
Helix 10
AB1
A
446 470Right-handed alpha
Helix 11
AB2
A
475 503Right-handed alpha
Helix 12
AB3
A
505 532Right-handed alpha
Helix 13
AB4
A
555 582Right-handed alpha
Helix 14
AB5
A
588 618Right-handed alpha
Helix 15
AB6
B
230 257Right-handed alpha
Helix 16
AB7
B
265 294Right-handed alpha
Helix 17
AB8
B
298 303Right-handed alpha
Helix 18
AB9
B
312 336Right-handed alpha
Helix 19
AC1
B
345 361Right-handed alpha
Helix 20
AC2
B
367 383Right-handed alpha
Helix 21
AC3
B
390 403Right-handed alpha
Helix 22
AC4
B
403 419Right-handed alpha
Helix 23
AC5
B
438 442Right-handed 310
Helix 24
AC6
B
446 470Right-handed alpha
Helix 25
AC7
B
475 503Right-handed alpha
Helix 26
AC8
B
505 532Right-handed alpha
Helix 27
AC9
B
555 582Right-handed alpha
Helix 28
AD1
B
588 618Right-handed alpha
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There are no sheets in PDB entry 9IJY
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il