Analysis of interatomic Contacts of Structural Units in PDB entry:
9IM2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9IM2 entry

There are 7 chains in PDB entry 9IM2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
E	PHE 240	PRO 785
F	LEU 321	PRO 785
A	LEU 321	PRO 785
B	LEU 321	PRO 785
C	ASP 2	PRO 785
D	PHE 240	PRO 785
X	T 1	T 7

There are149 helices in PDB entry 9IM2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	E	244	254	Right-handed alpha
Helix 2	AA2	E	259	263	Right-handed 310
Helix 3	AA3	E	310	314	Right-handed 310
Helix 4	AA4	E	324	336	Right-handed alpha
Helix 5	AA5	E	362	372	Right-handed alpha
Helix 6	AA6	E	373	375	Right-handed 310
Helix 7	AA7	E	376	381	Right-handed alpha
Helix 8	AA8	E	382	384	Right-handed 310
Helix 9	AA9	E	385	399	Right-handed alpha
Helix 10	AB1	E	430	436	Right-handed alpha
Helix 11	AB2	E	455	469	Right-handed alpha
Helix 12	AB3	E	472	474	Right-handed 310
Helix 13	AB4	E	475	488	Right-handed alpha
Helix 14	AB5	E	510	521	Right-handed alpha
Helix 15	AB6	E	528	533	Right-handed 310
Helix 16	AB7	E	541	548	Right-handed alpha
Helix 17	AB8	E	570	579	Right-handed alpha
Helix 18	AB9	E	614	619	Right-handed alpha
Helix 19	AC1	E	653	661	Right-handed alpha
Helix 20	AC2	E	664	680	Right-handed alpha
Helix 21	AC3	E	693	705	Right-handed alpha
Helix 22	AC4	E	710	714	Right-handed 310
Helix 23	AC5	E	716	723	Right-handed alpha
Helix 24	AC6	E	735	747	Right-handed alpha
Helix 25	AC7	E	748	764	Right-handed alpha
Helix 26	AC8	E	779	783	Right-handed alpha
Helix 27	AC9	F	324	335	Right-handed alpha
Helix 28	AD1	F	362	372	Right-handed alpha
Helix 29	AD2	F	373	375	Right-handed 310
Helix 30	AD3	F	376	384	Right-handed alpha
Helix 31	AD4	F	385	400	Right-handed alpha
Helix 32	AD5	F	431	436	Right-handed 310
Helix 33	AD6	F	456	469	Right-handed alpha
Helix 34	AD7	F	475	491	Right-handed alpha
Helix 35	AD8	F	508	521	Right-handed alpha
Helix 36	AD9	F	529	534	Right-handed alpha
Helix 37	AE1	F	541	547	Right-handed alpha
Helix 38	AE2	F	570	578	Right-handed alpha
Helix 39	AE3	F	614	619	Right-handed alpha
Helix 40	AE4	F	655	661	Right-handed alpha
Helix 41	AE5	F	664	680	Right-handed alpha
Helix 42	AE6	F	696	705	Right-handed alpha
Helix 43	AE7	F	710	714	Right-handed 310
Helix 44	AE8	F	716	721	Right-handed alpha
Helix 45	AE9	F	722	724	Right-handed 310
Helix 46	AF1	F	735	747	Right-handed alpha
Helix 47	AF2	F	752	763	Right-handed alpha
Helix 48	AF3	F	779	783	Right-handed alpha
Helix 49	AF4	A	324	336	Right-handed alpha
Helix 50	AF5	A	362	371	Right-handed alpha
Helix 51	AF6	A	379	384	Right-handed alpha
Helix 52	AF7	A	385	400	Right-handed alpha
Helix 53	AF8	A	430	435	Right-handed alpha
Helix 54	AF9	A	455	469	Right-handed alpha
Helix 55	AG1	A	475	488	Right-handed alpha
Helix 56	AG2	A	508	521	Right-handed alpha
Helix 57	AG3	A	528	533	Right-handed 310
Helix 58	AG4	A	541	546	Right-handed alpha
Helix 59	AG5	A	570	578	Right-handed alpha
Helix 60	AG6	A	614	619	Right-handed alpha
Helix 61	AG7	A	635	642	Right-handed alpha
Helix 62	AG8	A	654	661	Right-handed alpha
Helix 63	AG9	A	664	680	Right-handed alpha
Helix 64	AH1	A	693	705	Right-handed alpha
Helix 65	AH2	A	710	714	Right-handed 310
Helix 66	AH3	A	716	724	Right-handed alpha
Helix 67	AH4	A	736	747	Right-handed alpha
Helix 68	AH5	A	752	763	Right-handed alpha
Helix 69	AH6	A	779	783	Right-handed alpha
Helix 70	AH7	B	324	336	Right-handed alpha
Helix 71	AH8	B	362	371	Right-handed alpha
Helix 72	AH9	B	376	385	Right-handed alpha
Helix 73	AI1	B	385	400	Right-handed alpha
Helix 74	AI2	B	430	435	Right-handed alpha
Helix 75	AI3	B	455	469	Right-handed alpha
Helix 76	AI4	B	472	489	Right-handed alpha
Helix 77	AI5	B	508	521	Right-handed alpha
Helix 78	AI6	B	529	533	Right-handed 310
Helix 79	AI7	B	541	546	Right-handed alpha
Helix 80	AI8	B	570	577	Right-handed alpha
Helix 81	AI9	B	614	619	Right-handed alpha
Helix 82	AJ1	B	635	640	Right-handed alpha
Helix 83	AJ2	B	654	661	Right-handed alpha
Helix 84	AJ3	B	664	680	Right-handed alpha
Helix 85	AJ4	B	693	705	Right-handed alpha
Helix 86	AJ5	B	710	715	Right-handed 310
Helix 87	AJ6	B	716	721	Right-handed alpha
Helix 88	AJ7	B	722	724	Right-handed 310
Helix 89	AJ8	B	735	744	Right-handed alpha
Helix 90	AJ9	B	748	763	Right-handed alpha
Helix 91	AK1	B	779	783	Right-handed alpha
Helix 92	AK2	C	20	26	Right-handed alpha
Helix 93	AK3	C	36	47	Right-handed alpha
Helix 94	AK4	C	78	104	Right-handed alpha
Helix 95	AK5	C	108	119	Right-handed alpha
Helix 96	AK6	C	143	161	Right-handed alpha
Helix 97	AK7	C	165	169	Right-handed 310
Helix 98	AK8	C	170	174	Right-handed 310
Helix 99	AK9	C	203	208	Right-handed 310
Helix 100	AL1	C	324	336	Right-handed alpha
Helix 101	AL2	C	362	372	Right-handed alpha
Helix 102	AL3	C	376	381	Right-handed alpha
Helix 103	AL4	C	382	384	Right-handed 310
Helix 104	AL5	C	385	400	Right-handed alpha
Helix 105	AL6	C	430	435	Right-handed alpha
Helix 106	AL7	C	455	469	Right-handed alpha
Helix 107	AL8	C	475	488	Right-handed alpha
Helix 108	AL9	C	489	491	Right-handed 310
Helix 109	AM1	C	508	521	Right-handed alpha
Helix 110	AM2	C	528	533	Right-handed 310
Helix 111	AM3	C	541	546	Right-handed alpha
Helix 112	AM4	C	570	578	Right-handed alpha
Helix 113	AM5	C	614	619	Right-handed alpha
Helix 114	AM6	C	632	634	Right-handed 310
Helix 115	AM7	C	635	640	Right-handed alpha
Helix 116	AM8	C	654	661	Right-handed alpha
Helix 117	AM9	C	664	680	Right-handed alpha
Helix 118	AN1	C	693	705	Right-handed alpha
Helix 119	AN2	C	710	715	Right-handed 310
Helix 120	AN3	C	716	721	Right-handed alpha
Helix 121	AN4	C	722	724	Right-handed 310
Helix 122	AN5	C	735	745	Right-handed alpha
Helix 123	AN6	C	748	763	Right-handed alpha
Helix 124	AN7	C	779	783	Right-handed alpha
Helix 125	AN8	D	242	254	Right-handed alpha
Helix 126	AN9	D	310	314	Right-handed 310
Helix 127	AO1	D	324	336	Right-handed alpha
Helix 128	AO2	D	362	372	Right-handed alpha
Helix 129	AO3	D	373	375	Right-handed 310
Helix 130	AO4	D	376	385	Right-handed alpha
Helix 131	AO5	D	385	399	Right-handed alpha
Helix 132	AO6	D	429	436	Right-handed 310
Helix 133	AO7	D	455	469	Right-handed alpha
Helix 134	AO8	D	475	488	Right-handed alpha
Helix 135	AO9	D	508	521	Right-handed alpha
Helix 136	AP1	D	529	534	Right-handed alpha
Helix 137	AP2	D	541	548	Right-handed alpha
Helix 138	AP3	D	570	577	Right-handed alpha
Helix 139	AP4	D	614	619	Right-handed alpha
Helix 140	AP5	D	632	634	Right-handed 310
Helix 141	AP6	D	635	641	Right-handed alpha
Helix 142	AP7	D	656	661	Right-handed alpha
Helix 143	AP8	D	664	680	Right-handed alpha
Helix 144	AP9	D	693	705	Right-handed alpha
Helix 145	AQ1	D	710	715	Right-handed 310
Helix 146	AQ2	D	716	724	Right-handed alpha
Helix 147	AQ3	D	735	745	Right-handed alpha
Helix 148	AQ4	D	749	751	Right-handed 310
Helix 149	AQ5	D	752	763	Right-handed alpha

There are 46 sheets in PDB entry 9IM2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	294	299	first strand
Strand 2	E	302	307	anti-parallel
Strand 3	E	317	319	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	339	341	first strand
Strand 2	E	347	350	anti-parallel
Strand 3	E	355	357	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	412	414	first strand
Strand 2	E	419	421	anti-parallel
Strand 3	E	427	428	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	524	526	first strand
Strand 2	E	552	555	parallel
Strand 3	E	599	604	parallel
Strand 4	E	498	502	parallel
Strand 5	E	621	625	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	581	583	first strand
Strand 2	E	593	595	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	629	630	first strand
Strand 2	E	648	649	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	706	708	first strand
Strand 2	E	776	778	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	726	728	first strand
Strand 2	E	731	733	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	765	766	first strand
Strand 2	E	772	773	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	339	341	first strand
Strand 2	F	347	351	anti-parallel
Strand 3	F	354	357	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	412	414	first strand
Strand 2	F	419	421	anti-parallel
Strand 3	F	427	428	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	524	526	first strand
Strand 2	F	552	555	parallel
Strand 3	F	599	604	parallel
Strand 4	F	498	503	parallel
Strand 5	F	621	626	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	706	707	first strand
Strand 2	F	777	778	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	726	728	first strand
Strand 2	F	731	733	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	765	766	first strand
Strand 2	F	772	773	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	341	first strand
Strand 2	A	347	350	anti-parallel
Strand 3	A	355	356	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	412	415	first strand
Strand 2	A	418	421	anti-parallel
Strand 3	A	427	428	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	524	526	first strand
Strand 2	A	552	556	parallel
Strand 3	A	599	604	parallel
Strand 4	A	498	503	parallel
Strand 5	A	621	626	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	581	583	first strand
Strand 2	A	593	595	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	629	630	first strand
Strand 2	A	648	649	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	706	708	first strand
Strand 2	A	776	778	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	726	728	first strand
Strand 2	A	731	735	anti-parallel
Strand 3	A	772	774	anti-parallel
Strand 4	A	765	766	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	341	first strand
Strand 2	B	347	350	anti-parallel
Strand 3	B	355	356	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	412	415	first strand
Strand 2	B	418	421	anti-parallel
Strand 3	B	427	428	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	524	526	first strand
Strand 2	B	552	558	parallel
Strand 3	B	599	604	parallel
Strand 4	B	498	503	parallel
Strand 5	B	621	626	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	581	583	first strand
Strand 2	B	593	595	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	629	631	first strand
Strand 2	B	648	650	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	706	708	first strand
Strand 2	B	776	778	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	726	728	first strand
Strand 2	B	731	733	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	32	35	first strand
Strand 2	C	11	14	anti-parallel
Strand 3	C	53	54	anti-parallel
Strand 4	C	180	181	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	65	73	first strand
Strand 2	C	131	142	anti-parallel
Strand 3	C	219	220	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	124	125	first strand
Strand 2	C	195	196	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	339	341	first strand
Strand 2	C	347	350	anti-parallel
Strand 3	C	355	356	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	412	414	first strand
Strand 2	C	419	421	anti-parallel
Strand 3	C	427	428	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	524	526	first strand
Strand 2	C	552	556	parallel
Strand 3	C	599	604	parallel
Strand 4	C	498	503	parallel
Strand 5	C	621	626	parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	581	583	first strand
Strand 2	C	593	595	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	628	631	first strand
Strand 2	C	647	650	parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	706	708	first strand
Strand 2	C	776	778	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	726	728	first strand
Strand 2	C	731	733	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	294	299	first strand
Strand 2	D	302	307	anti-parallel
Strand 3	D	317	320	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	339	341	first strand
Strand 2	D	347	351	anti-parallel
Strand 3	D	354	357	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	412	415	first strand
Strand 2	D	418	421	anti-parallel

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There are 5 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	524	527	first strand
Strand 2	D	552	555	parallel
Strand 3	D	599	604	parallel
Strand 4	D	498	503	parallel
Strand 5	D	622	626	parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	581	582	first strand
Strand 2	D	594	595	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	629	631	first strand
Strand 2	D	648	650	parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	706	707	first strand
Strand 2	D	777	778	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9IM2

Analysis of interatomic Contacts of Structural Units in PDB entry:
9IM2