Analysis of interatomic Contacts of Structural Units in PDB entry:
9IM6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9IM6 entry

There are 2 chains in PDB entry 9IM6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 21ALA 1115
B
 GLY -2TYR 217
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 9IM6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 38Right-handed alpha
Helix 2
AA2
A
39 52Right-handed alpha
Helix 3
AA3
A
55 69Right-handed alpha
Helix 4
AA4
A
73 92Right-handed alpha
Helix 5
AA5
A
93 95Right-handed 310
Helix 6
AA6
A
100 118Right-handed alpha
Helix 7
AA7
A
120 138Right-handed alpha
Helix 8
AA8
A
147 159Right-handed alpha
Helix 9
AA9
A
162 176Right-handed alpha
Helix 10
AB1
A
187 199Right-handed alpha
Helix 11
AB2
A
204 222Right-handed alpha
Helix 12
AB3
A
225 232Right-handed alpha
Helix 13
AB4
A
235 248Right-handed alpha
Helix 14
AB5
A
252 265Right-handed alpha
Helix 15
AB6
A
266 271Right-handed 310
Helix 16
AB7
A
272 286Right-handed alpha
Helix 17
AB8
A
290 308Right-handed alpha
Helix 18
AB9
A
308 313Right-handed alpha
Helix 19
AC1
A
315 330Right-handed alpha
Helix 20
AC2
A
352 369Right-handed alpha
Helix 21
AC3
A
369 385Right-handed alpha
Helix 22
AC4
A
391 403Right-handed alpha
Helix 23
AC5
A
407 412Right-handed alpha
Helix 24
AC6
A
414 424Right-handed alpha
Helix 25
AC7
A
430 448Right-handed alpha
Helix 26
AC8
A
450 470Right-handed alpha
Helix 27
AC9
A
473 491Right-handed alpha
Helix 28
AD1
A
492 498Right-handed 310
Helix 29
AD2
A
499 505Right-handed alpha
Helix 30
AD3
A
507 521Right-handed alpha
Helix 31
AD4
A
524 542Right-handed alpha
Helix 32
AD5
A
545 562Right-handed alpha
Helix 33
AD6
A
568 592Right-handed alpha
Helix 34
AD7
A
594 610Right-handed alpha
Helix 35
AD8
A
616 619Right-handed 310
Helix 36
AD9
A
620 633Right-handed alpha
Helix 37
AE1
A
635 639Right-handed 310
Helix 38
AE2
A
640 653Right-handed alpha
Helix 39
AE3
A
662 667Right-handed alpha
Helix 40
AE4
A
668 670Right-handed 310
Helix 41
AE5
A
692 711Right-handed alpha
Helix 42
AE6
A
712 716Right-handed 310
Helix 43
AE7
A
717 726Right-handed alpha
Helix 44
AE8
A
727 731Right-handed 310
Helix 45
AE9
A
734 753Right-handed alpha
Helix 46
AF1
A
756 776Right-handed alpha
Helix 47
AF2
A
780 798Right-handed alpha
Helix 48
AF3
A
804 833Right-handed alpha
Helix 49
AF4
A
839 872Right-handed alpha
Helix 50
AF5
A
875 890Right-handed alpha
Helix 51
AF6
A
895 913Right-handed alpha
Helix 52
AF7
A
915 919Right-handed 310
Helix 53
AF8
A
920 931Right-handed alpha
Helix 54
AF9
A
932 934Right-handed 310
Helix 55
AG1
A
936 953Right-handed alpha
Helix 56
AG2
A
958 975Right-handed alpha
Helix 57
AG3
A
983 1001Right-handed alpha
Helix 58
AG4
A
1002 1005Right-handed 310
Helix 59
AG5
A
1006 1018Right-handed alpha
Helix 60
AG6
A
1023 1041Right-handed alpha
Helix 61
AG7
A
1052 1064Right-handed alpha
Helix 62
AG8
A
1073 1087Right-handed alpha
Helix 63
AG9
A
1089 1098Right-handed alpha
Helix 64
AH1
A
1101 1115Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9IM6.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
658 661first strand
Strand 2
A
684 689anti-parallel
Strand 3
A
675 680anti-parallel
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