Analysis of interatomic Contacts of Structural Units in PDB entry:
9IMI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9IMI entry

There is 1 chain in PDB entry 9IMI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 7SER 460
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 9IMI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 34Right-handed alpha
Helix 2
AA2
A
44 54Right-handed alpha
Helix 3
AA3
A
56 60Right-handed 310
Helix 4
AA4
A
77 81Right-handed 310
Helix 5
AA5
A
87 89Right-handed 310
Helix 6
AA6
A
90 101Right-handed alpha
Helix 7
AA7
A
101 113Right-handed alpha
Helix 8
AA8
A
123 133Right-handed alpha
Helix 9
AA9
A
144 156Right-handed alpha
Helix 10
AB1
A
173 175Right-handed 310
Helix 11
AB2
A
176 186Right-handed alpha
Helix 12
AB3
A
196 205Right-handed alpha
Helix 13
AB4
A
215 231Right-handed alpha
Helix 14
AB5
A
252 260Right-handed alpha
Helix 15
AB6
A
278 293Right-handed alpha
Helix 16
AB7
A
310 314Right-handed alpha
Helix 17
AB8
A
317 323Right-handed alpha
Helix 18
AB9
A
334 341Right-handed alpha
Helix 19
AC1
A
352 363Right-handed alpha
Helix 20
AC2
A
374 386Right-handed alpha
Helix 21
AC3
A
400 413Right-handed alpha
Helix 22
AC4
A
414 416Right-handed 310
Helix 23
AC5
A
417 435Right-handed alpha
Helix 24
AC6
A
436 458Right-handed alpha
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There are 2 sheets in PDB entry 9IMI. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 67first strand
Strand 2
A
38 43parallel
Strand 3
A
10 14parallel
Strand 4
A
116 119parallel
Strand 5
A
137 141parallel
Strand 6
A
209 212parallel
Strand 7
A
233 236parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
326 330first strand
Strand 2
A
296 300parallel
Strand 3
A
266 270parallel
Strand 4
A
344 349parallel
Strand 5
A
366 368parallel
Strand 6
A
388 390parallel
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