Analysis of interatomic Contacts of Structural Units in PDB entry:
9IMN

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9IMN entry

There are 34 chains in PDB entry 9IMN (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 10	ALA 336
B	GLY 2	GLY 481
C	GLY 12	ASP 461
D	THR 2	LEU 352
E	ARG 8	ASN 82
F	ILE 14	ARG 44
G	ALA 86	ALA 325
H	PHE 17	ALA 85
I	MET 1	LYS 34
K	LYS 10	ARG 46
L	MET 1	ASN 38
M	ASN 4	ALA 30
T	MET 1	LYS 31
V	ILE 3	LEU 33
W	PRO 79	PHE 97
X	ALA 64	LYS 95
Z	MET 1	VAL 61
a	ASN 10	ALA 336
b	GLY 2	GLY 481
c	GLY 12	ASP 461
d	THR 2	LEU 352
e	ARG 8	ASN 82
f	ILE 14	ARG 44
g	ALA 86	ALA 325
h	PHE 17	ALA 85
i	MET 1	LYS 34
k	LYS 10	ARG 46
l	MET 1	ASN 38
m	ASN 4	ALA 30
t	MET 1	LYS 31
v	ILE 3	LEU 33
w	PRO 79	PHE 97
x	ALA 64	LYS 95
z	MET 1	VAL 61

There are214 helices in PDB entry 9IMN. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	12	22	Right-handed alpha
Helix 2	AA2	A	33	54	Right-handed alpha
Helix 3	AA3	A	95	99	Right-handed 310
Helix 4	AA4	A	101	108	Right-handed alpha
Helix 5	AA5	A	109	138	Right-handed alpha
Helix 6	AA6	A	142	159	Right-handed alpha
Helix 7	AA7	A	159	166	Right-handed alpha
Helix 8	AA8	A	167	171	Right-handed 310
Helix 9	AA9	A	175	190	Right-handed alpha
Helix 10	AB1	A	195	223	Right-handed alpha
Helix 11	AB2	A	248	260	Right-handed alpha
Helix 12	AB3	A	267	294	Right-handed alpha
Helix 13	AB4	A	308	312	Right-handed 310
Helix 14	AB5	A	316	333	Right-handed alpha
Helix 15	AB6	B	7	14	Right-handed 310
Helix 16	AB7	B	15	45	Right-handed alpha
Helix 17	AB8	B	54	58	Right-handed 310
Helix 18	AB9	B	62	69	Right-handed alpha
Helix 19	AC1	B	92	117	Right-handed alpha
Helix 20	AC2	B	120	124	Right-handed 310
Helix 21	AC3	B	134	156	Right-handed alpha
Helix 22	AC4	B	186	191	Right-handed 310
Helix 23	AC5	B	194	219	Right-handed alpha
Helix 24	AC6	B	222	229	Right-handed alpha
Helix 25	AC7	B	234	259	Right-handed alpha
Helix 26	AC8	B	264	269	Right-handed alpha
Helix 27	AC9	B	271	277	Right-handed alpha
Helix 28	AD1	B	278	295	Right-handed alpha
Helix 29	AD2	B	297	304	Right-handed alpha
Helix 30	AD3	B	306	313	Right-handed alpha
Helix 31	AD4	B	318	322	Right-handed 310
Helix 32	AD5	B	330	335	Right-handed alpha
Helix 33	AD6	B	391	396	Right-handed alpha
Helix 34	AD7	B	403	407	Right-handed 310
Helix 35	AD8	B	413	426	Right-handed alpha
Helix 36	AD9	B	446	475	Right-handed alpha
Helix 37	AE1	B	475	481	Right-handed alpha
Helix 38	AE2	C	15	20	Right-handed alpha
Helix 39	AE3	C	22	31	Right-handed 310
Helix 40	AE4	C	33	62	Right-handed alpha
Helix 41	AE5	C	76	84	Right-handed alpha
Helix 42	AE6	C	88	92	Right-handed 310
Helix 43	AE7	C	96	123	Right-handed alpha
Helix 44	AE8	C	142	169	Right-handed alpha
Helix 45	AE9	C	193	203	Right-handed alpha
Helix 46	AF1	C	210	215	Right-handed 310
Helix 47	AF2	C	217	241	Right-handed alpha
Helix 48	AF3	C	245	250	Right-handed alpha
Helix 49	AF4	C	255	281	Right-handed alpha
Helix 50	AF5	C	286	291	Right-handed alpha
Helix 51	AF6	C	293	314	Right-handed alpha
Helix 52	AF7	C	341	347	Right-handed 310
Helix 53	AF8	C	354	356	Right-handed 310
Helix 54	AF9	C	364	371	Right-handed alpha
Helix 55	AG1	C	373	386	Right-handed alpha
Helix 56	AG2	C	409	442	Right-handed alpha
Helix 57	AG3	C	452	457	Right-handed 310
Helix 58	AG4	D	13	23	Right-handed alpha
Helix 59	AG5	D	33	54	Right-handed alpha
Helix 60	AG6	D	82	86	Right-handed 310
Helix 61	AG7	D	100	108	Right-handed alpha
Helix 62	AG8	D	108	137	Right-handed alpha
Helix 63	AG9	D	140	158	Right-handed alpha
Helix 64	AH1	D	158	164	Right-handed alpha
Helix 65	AH2	D	166	170	Right-handed 310
Helix 66	AH3	D	175	190	Right-handed alpha
Helix 67	AH4	D	191	193	Right-handed 310
Helix 68	AH5	D	194	221	Right-handed alpha
Helix 69	AH6	D	245	257	Right-handed alpha
Helix 70	AH7	D	263	290	Right-handed alpha
Helix 71	AH8	D	298	308	Right-handed alpha
Helix 72	AH9	D	313	334	Right-handed alpha
Helix 73	AI1	D	335	338	Right-handed 310
Helix 74	AI2	D	348	352	Right-handed 310
Helix 75	AI3	E	9	16	Right-handed alpha
Helix 76	AI4	E	16	40	Right-handed alpha
Helix 77	AI5	E	41	47	Right-handed alpha
Helix 78	AI6	E	52	56	Right-handed 310
Helix 79	AI7	E	71	80	Right-handed alpha
Helix 80	AI8	F	16	41	Right-handed alpha
Helix 81	AI9	G	132	142	Right-handed alpha
Helix 82	AJ1	G	167	169	Right-handed 310
Helix 83	AJ2	G	170	178	Right-handed alpha
Helix 84	AJ3	G	183	216	Right-handed alpha
Helix 85	AJ4	G	218	232	Right-handed alpha
Helix 86	AJ5	G	246	263	Right-handed alpha
Helix 87	AJ6	G	266	280	Right-handed alpha
Helix 88	AJ7	G	284	290	Right-handed alpha
Helix 89	AJ8	G	293	299	Right-handed alpha
Helix 90	AJ9	G	299	310	Right-handed alpha
Helix 91	AK1	G	315	325	Right-handed alpha
Helix 92	AK2	H	24	31	Right-handed alpha
Helix 93	AK3	H	46	69	Right-handed alpha
Helix 94	AK4	H	80	85	Right-handed 310
Helix 95	AK5	I	2	26	Right-handed alpha
Helix 96	AK6	K	12	17	Right-handed 310
Helix 97	AK7	K	18	25	Right-handed alpha
Helix 98	AK8	K	26	29	Right-handed 310
Helix 99	AK9	K	30	44	Right-handed alpha
Helix 100	AL1	L	14	38	Right-handed alpha
Helix 101	AL2	M	5	30	Right-handed alpha
Helix 102	AL3	T	2	23	Right-handed alpha
Helix 103	AL4	V	4	30	Right-handed alpha
Helix 104	AL5	W	80	97	Right-handed alpha
Helix 105	AL6	X	66	95	Right-handed alpha
Helix 106	AL7	Z	2	29	Right-handed alpha
Helix 107	AL8	Z	36	61	Right-handed alpha
Helix 108	AL9	a	12	22	Right-handed alpha
Helix 109	AM1	a	33	54	Right-handed alpha
Helix 110	AM2	a	95	99	Right-handed 310
Helix 111	AM3	a	101	108	Right-handed alpha
Helix 112	AM4	a	109	138	Right-handed alpha
Helix 113	AM5	a	142	159	Right-handed alpha
Helix 114	AM6	a	159	166	Right-handed alpha
Helix 115	AM7	a	167	171	Right-handed 310
Helix 116	AM8	a	175	190	Right-handed alpha
Helix 117	AM9	a	195	223	Right-handed alpha
Helix 118	AN1	a	248	259	Right-handed alpha
Helix 119	AN2	a	267	294	Right-handed alpha
Helix 120	AN3	a	308	312	Right-handed 310
Helix 121	AN4	a	316	333	Right-handed alpha
Helix 122	AN5	b	7	13	Right-handed 310
Helix 123	AN6	b	15	43	Right-handed alpha
Helix 124	AN7	b	55	59	Right-handed 310
Helix 125	AN8	b	62	69	Right-handed alpha
Helix 126	AN9	b	92	117	Right-handed alpha
Helix 127	AO1	b	120	124	Right-handed 310
Helix 128	AO2	b	134	157	Right-handed alpha
Helix 129	AO3	b	186	191	Right-handed 310
Helix 130	AO4	b	194	219	Right-handed alpha
Helix 131	AO5	b	222	229	Right-handed alpha
Helix 132	AO6	b	234	259	Right-handed alpha
Helix 133	AO7	b	264	269	Right-handed alpha
Helix 134	AO8	b	271	277	Right-handed alpha
Helix 135	AO9	b	278	294	Right-handed alpha
Helix 136	AP1	b	297	304	Right-handed alpha
Helix 137	AP2	b	306	313	Right-handed alpha
Helix 138	AP3	b	318	322	Right-handed 310
Helix 139	AP4	b	330	335	Right-handed alpha
Helix 140	AP5	b	391	396	Right-handed alpha
Helix 141	AP6	b	413	425	Right-handed alpha
Helix 142	AP7	b	446	475	Right-handed alpha
Helix 143	AP8	b	475	481	Right-handed alpha
Helix 144	AP9	c	15	20	Right-handed alpha
Helix 145	AQ1	c	22	31	Right-handed 310
Helix 146	AQ2	c	33	61	Right-handed alpha
Helix 147	AQ3	c	68	72	Right-handed 310
Helix 148	AQ4	c	76	84	Right-handed alpha
Helix 149	AQ5	c	88	92	Right-handed 310
Helix 150	AQ6	c	96	123	Right-handed alpha
Helix 151	AQ7	c	142	169	Right-handed alpha
Helix 152	AQ8	c	193	203	Right-handed alpha
Helix 153	AQ9	c	210	215	Right-handed 310
Helix 154	AR1	c	217	241	Right-handed alpha
Helix 155	AR2	c	245	250	Right-handed alpha
Helix 156	AR3	c	255	281	Right-handed alpha
Helix 157	AR4	c	286	291	Right-handed alpha
Helix 158	AR5	c	293	314	Right-handed alpha
Helix 159	AR6	c	341	347	Right-handed 310
Helix 160	AR7	c	354	356	Right-handed 310
Helix 161	AR8	c	364	371	Right-handed alpha
Helix 162	AR9	c	373	386	Right-handed alpha
Helix 163	AS1	c	409	442	Right-handed alpha
Helix 164	AS2	c	453	457	Right-handed 310
Helix 165	AS3	d	13	23	Right-handed alpha
Helix 166	AS4	d	33	54	Right-handed alpha
Helix 167	AS5	d	82	86	Right-handed 310
Helix 168	AS6	d	100	107	Right-handed alpha
Helix 169	AS7	d	108	137	Right-handed alpha
Helix 170	AS8	d	140	146	Right-handed alpha
Helix 171	AS9	d	146	158	Right-handed alpha
Helix 172	AT1	d	158	164	Right-handed alpha
Helix 173	AT2	d	166	170	Right-handed 310
Helix 174	AT3	d	175	190	Right-handed alpha
Helix 175	AT4	d	191	193	Right-handed 310
Helix 176	AT5	d	194	221	Right-handed alpha
Helix 177	AT6	d	245	257	Right-handed alpha
Helix 178	AT7	d	263	291	Right-handed alpha
Helix 179	AT8	d	298	308	Right-handed alpha
Helix 180	AT9	d	313	334	Right-handed alpha
Helix 181	AU1	d	335	338	Right-handed 310
Helix 182	AU2	d	348	352	Right-handed 310
Helix 183	AU3	e	9	16	Right-handed alpha
Helix 184	AU4	e	16	40	Right-handed alpha
Helix 185	AU5	e	41	47	Right-handed alpha
Helix 186	AU6	e	52	56	Right-handed 310
Helix 187	AU7	e	71	80	Right-handed alpha
Helix 188	AU8	f	16	39	Right-handed alpha
Helix 189	AU9	g	132	142	Right-handed alpha
Helix 190	AV1	g	167	169	Right-handed 310
Helix 191	AV2	g	170	178	Right-handed alpha
Helix 192	AV3	g	183	216	Right-handed alpha
Helix 193	AV4	g	218	232	Right-handed alpha
Helix 194	AV5	g	246	263	Right-handed alpha
Helix 195	AV6	g	266	280	Right-handed alpha
Helix 196	AV7	g	290	292	Right-handed 310
Helix 197	AV8	g	293	299	Right-handed alpha
Helix 198	AV9	g	299	310	Right-handed alpha
Helix 199	AW1	g	315	325	Right-handed alpha
Helix 200	AW2	h	24	31	Right-handed alpha
Helix 201	AW3	h	46	69	Right-handed alpha
Helix 202	AW4	h	80	85	Right-handed 310
Helix 203	AW5	i	2	26	Right-handed alpha
Helix 204	AW6	k	12	17	Right-handed 310
Helix 205	AW7	k	18	25	Right-handed alpha
Helix 206	AW8	k	27	44	Right-handed alpha
Helix 207	AW9	l	14	38	Right-handed alpha
Helix 208	AX1	m	5	30	Right-handed alpha
Helix 209	AX2	t	2	23	Right-handed alpha
Helix 210	AX3	v	4	30	Right-handed alpha
Helix 211	AX4	w	80	97	Right-handed alpha
Helix 212	AX5	x	66	95	Right-handed alpha
Helix 213	AX6	z	2	29	Right-handed alpha
Helix 214	AX7	z	36	61	Right-handed alpha

There are 18 sheets in PDB entry 9IMN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	297	298	first strand
Strand 2	C	390	391	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	166	169	first strand
Strand 2	B	176	179	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	336	340	first strand
Strand 2	B	430	433	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	377	380	first strand
Strand 2	B	369	372	anti-parallel
Strand 3	B	353	356	anti-parallel
Strand 4	B	343	347	anti-parallel
Strand 5	B	398	402	anti-parallel
Strand 6	B	410	411	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	173	175	first strand
Strand 2	C	183	185	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	329	331	first strand
Strand 2	C	337	339	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	358	359	first strand
Strand 2	C	362	363	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	4	first strand
Strand 2	D	9	10	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	77	78	first strand
Strand 2	D	173	174	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	297	298	first strand
Strand 2	c	390	391	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	166	169	first strand
Strand 2	b	176	179	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	336	340	first strand
Strand 2	b	430	433	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	377	380	first strand
Strand 2	b	369	372	anti-parallel
Strand 3	b	353	356	anti-parallel
Strand 4	b	343	347	anti-parallel
Strand 5	b	398	402	anti-parallel
Strand 6	b	410	411	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	173	175	first strand
Strand 2	c	183	185	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	329	331	first strand
Strand 2	c	337	339	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	358	359	first strand
Strand 2	c	362	363	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	3	5	first strand
Strand 2	d	8	10	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	77	78	first strand
Strand 2	d	173	174	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9IMN

Analysis of interatomic Contacts of Structural Units in PDB entry:
9IMN