Analysis of interatomic Contacts of Structural Units in PDB entry:
9IMQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9IMQ entry

There are 2 chains in PDB entry 9IMQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 4GLY 335
B
 PRO 4HIS 334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 9IMQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 39Right-handed alpha
Helix 2
AA2
A
41 43Right-handed 310
Helix 3
AA3
A
44 54Right-handed alpha
Helix 4
AA4
A
58 69Right-handed alpha
Helix 5
AA5
A
76 101Right-handed alpha
Helix 6
AA6
A
111 117Right-handed alpha
Helix 7
AA7
A
117 138Right-handed alpha
Helix 8
AA8
A
140 167Right-handed alpha
Helix 9
AA9
A
171 183Right-handed alpha
Helix 10
AB1
A
183 199Right-handed alpha
Helix 11
AB2
A
201 230Right-handed alpha
Helix 12
AB3
A
240 245Right-handed alpha
Helix 13
AB4
A
249 258Right-handed alpha
Helix 14
AB5
A
260 270Right-handed alpha
Helix 15
AB6
A
276 290Right-handed alpha
Helix 16
AB7
A
290 313Right-handed alpha
Helix 17
AB8
A
317 333Right-handed alpha
Helix 18
AB9
B
15 38Right-handed alpha
Helix 19
AC1
B
58 68Right-handed alpha
Helix 20
AC2
B
69 71Right-handed 310
Helix 21
AC3
B
76 98Right-handed alpha
Helix 22
AC4
B
115 140Right-handed alpha
Helix 23
AC5
B
140 167Right-handed alpha
Helix 24
AC6
B
171 183Right-handed alpha
Helix 25
AC7
B
183 198Right-handed alpha
Helix 26
AC8
B
201 230Right-handed alpha
Helix 27
AC9
B
231 235Right-handed 310
Helix 28
AD1
B
240 245Right-handed alpha
Helix 29
AD2
B
249 258Right-handed alpha
Helix 30
AD3
B
262 270Right-handed alpha
Helix 31
AD4
B
280 289Right-handed alpha
Helix 32
AD5
B
290 313Right-handed alpha
Helix 33
AD6
B
317 333Right-handed alpha
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There are 2 sheets in PDB entry 9IMQ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 106first strand
Strand 2
A
109 110anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 8first strand
Strand 2
B
11 12anti-parallel
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