Analysis of interatomic Contacts of Structural Units in PDB entry:
9IMS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9IMS entry

There are 2 chains in PDB entry 9IMS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 4HIS 334
B
 ALA 5SER 332
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 9IMS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 38Right-handed alpha
Helix 2
AA2
A
58 68Right-handed alpha
Helix 3
AA3
A
75 101Right-handed alpha
Helix 4
AA4
A
118 138Right-handed alpha
Helix 5
AA5
A
140 162Right-handed alpha
Helix 6
AA6
A
170 183Right-handed alpha
Helix 7
AA7
A
183 197Right-handed alpha
Helix 8
AA8
A
201 230Right-handed alpha
Helix 9
AA9
A
249 256Right-handed alpha
Helix 10
AB1
A
277 290Right-handed alpha
Helix 11
AB2
A
290 313Right-handed alpha
Helix 12
AB3
A
317 332Right-handed alpha
Helix 13
AB4
B
15 38Right-handed alpha
Helix 14
AB5
B
58 69Right-handed alpha
Helix 15
AB6
B
76 98Right-handed alpha
Helix 16
AB7
B
117 140Right-handed alpha
Helix 17
AB8
B
140 162Right-handed alpha
Helix 18
AB9
B
170 183Right-handed alpha
Helix 19
AC1
B
183 198Right-handed alpha
Helix 20
AC2
B
201 227Right-handed alpha
Helix 21
AC3
B
240 246Right-handed alpha
Helix 22
AC4
B
249 256Right-handed alpha
Helix 23
AC5
B
276 288Right-handed alpha
Helix 24
AC6
B
290 313Right-handed alpha
Helix 25
AC7
B
317 331Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9IMS.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 8first strand
Strand 2
A
11 12anti-parallel
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