Analysis of interatomic Contacts of Structural Units in PDB entry:
9IMZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9IMZ entry

There are 5 chains in PDB entry 9IMZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1THR 833
B
 MET 1THR 832
C
 MET 1GLU 154
D
 MET 1GLU 154
E
 MET 1GLU 154
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 76 helices in PDB entry 9IMZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 10Right-handed alpha
Helix 2
AA2
A
14 23Right-handed alpha
Helix 3
AA3
A
34 41Right-handed alpha
Helix 4
AA4
A
42 46Right-handed 310
Helix 5
AA5
A
48 62Right-handed alpha
Helix 6
AA6
A
250 262Right-handed alpha
Helix 7
AA7
A
292 296Right-handed 310
Helix 8
AA8
A
299 315Right-handed alpha
Helix 9
AA9
A
320 332Right-handed alpha
Helix 10
AB1
A
362 375Right-handed alpha
Helix 11
AB2
A
377 382Right-handed alpha
Helix 12
AB3
A
385 394Right-handed alpha
Helix 13
AB4
A
397 401Right-handed 310
Helix 14
AB5
A
402 416Right-handed alpha
Helix 15
AB6
A
450 467Right-handed alpha
Helix 16
AB7
A
476 482Right-handed alpha
Helix 17
AB8
A
483 496Right-handed alpha
Helix 18
AB9
A
497 515Right-handed alpha
Helix 19
AC1
A
539 547Right-handed alpha
Helix 20
AC2
A
565 567Right-handed 310
Helix 21
AC3
A
568 579Right-handed alpha
Helix 22
AC4
A
580 600Right-handed alpha
Helix 23
AC5
A
624 645Right-handed alpha
Helix 24
AC6
A
646 649Right-handed 310
Helix 25
AC7
A
659 669Right-handed alpha
Helix 26
AC8
A
675 686Right-handed alpha
Helix 27
AC9
A
688 700Right-handed alpha
Helix 28
AD1
A
701 703Right-handed 310
Helix 29
AD2
A
706 710Right-handed 310
Helix 30
AD3
A
711 727Right-handed alpha
Helix 31
AD4
A
738 753Right-handed alpha
Helix 32
AD5
A
761 766Right-handed alpha
Helix 33
AD6
A
791 799Right-handed alpha
Helix 34
AD7
A
800 802Right-handed 310
Helix 35
AD8
A
803 815Right-handed alpha
Helix 36
AD9
B
3 10Right-handed alpha
Helix 37
AE1
B
14 24Right-handed alpha
Helix 38
AE2
B
34 41Right-handed alpha
Helix 39
AE3
B
42 46Right-handed 310
Helix 40
AE4
B
48 61Right-handed alpha
Helix 41
AE5
B
292 296Right-handed 310
Helix 42
AE6
B
299 315Right-handed alpha
Helix 43
AE7
B
320 333Right-handed alpha
Helix 44
AE8
B
362 375Right-handed alpha
Helix 45
AE9
B
377 382Right-handed alpha
Helix 46
AF1
B
385 395Right-handed alpha
Helix 47
AF2
B
395 402Right-handed alpha
Helix 48
AF3
B
402 413Right-handed alpha
Helix 49
AF4
B
450 470Right-handed alpha
Helix 50
AF5
B
476 482Right-handed alpha
Helix 51
AF6
B
483 496Right-handed alpha
Helix 52
AF7
B
497 515Right-handed alpha
Helix 53
AF8
B
539 547Right-handed alpha
Helix 54
AF9
B
548 551Right-handed 310
Helix 55
AG1
B
565 567Right-handed 310
Helix 56
AG2
B
568 579Right-handed alpha
Helix 57
AG3
B
580 599Right-handed alpha
Helix 58
AG4
B
624 645Right-handed alpha
Helix 59
AG5
B
657 668Right-handed alpha
Helix 60
AG6
B
675 686Right-handed alpha
Helix 61
AG7
B
688 701Right-handed alpha
Helix 62
AG8
B
705 710Right-handed alpha
Helix 63
AG9
B
711 725Right-handed alpha
Helix 64
AH1
B
731 736Right-handed alpha
Helix 65
AH2
B
738 753Right-handed alpha
Helix 66
AH3
B
759 764Right-handed 310
Helix 67
AH4
B
791 799Right-handed alpha
Helix 68
AH5
B
800 802Right-handed 310
Helix 69
AH6
B
803 815Right-handed alpha
Helix 70
AH7
C
50 52Right-handed 310
Helix 71
AH8
C
119 125Right-handed alpha
Helix 72
AH9
D
50 54Right-handed 310
Helix 73
AI1
D
80 84Right-handed 310
Helix 74
AI2
D
119 125Right-handed alpha
Helix 75
AI3
E
85 90Right-handed alpha
Helix 76
AI4
E
119 125Right-handed alpha
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There are 8 sheets in PDB entry 9IMZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 197first strand
Strand 2
E
55 62parallel
Strand 3
E
38 44anti-parallel
Strand 4
E
91 101anti-parallel
Strand 5
E
104 116anti-parallel
Strand 6
E
136 148anti-parallel
Strand 7
E
16 17anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
826 827first strand
Strand 2
C
54 62parallel
Strand 3
C
38 45anti-parallel
Strand 4
C
91 101anti-parallel
Strand 5
C
104 117anti-parallel
Strand 6
C
135 139anti-parallel
Strand 7
C
16 17anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
826 827first strand
Strand 2
C
54 62parallel
Strand 3
C
38 45anti-parallel
Strand 4
C
91 101anti-parallel
Strand 5
C
104 117anti-parallel
Strand 6
C
145 148anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
830 832first strand
Strand 2
C
68 76anti-parallel
Strand 3
C
22 30anti-parallel
Strand 4
C
5 11anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4 11first strand
Strand 2
D
22 30anti-parallel
Strand 3
D
68 76anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
16 17first strand
Strand 2
D
135 139anti-parallel
Strand 3
D
104 117anti-parallel
Strand 4
D
91 101anti-parallel
Strand 5
D
39 44anti-parallel
Strand 6
D
55 61anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
16 17first strand
Strand 2
D
135 139anti-parallel
Strand 3
D
104 117anti-parallel
Strand 4
D
145 148anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
4 12first strand
Strand 2
E
22 30anti-parallel
Strand 3
E
71 76anti-parallel
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