Analysis of interatomic Contacts of Structural Units in PDB entry:
9IP3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9IP3 entry

There are 5 chains in PDB entry 9IP3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 6ASN 1393
B
 ASP 123ILE 340
C
 MET 124SER 179
D
 PRO 120THR 149
E
 ASP 123VAL 146
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 90 helices in PDB entry 9IP3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 30Right-handed alpha
Helix 2
AA2
A
39 44Right-handed alpha
Helix 3
AA3
A
47 52Right-handed alpha
Helix 4
AA4
A
53 55Right-handed 310
Helix 5
AA5
A
56 63Right-handed alpha
Helix 6
AA6
A
72 84Right-handed alpha
Helix 7
AA7
A
95 122Right-handed alpha
Helix 8
AA8
A
131 143Right-handed alpha
Helix 9
AA9
A
145 165Right-handed alpha
Helix 10
AB1
A
168 172Right-handed 310
Helix 11
AB2
A
196 198Right-handed 310
Helix 12
AB3
A
206 213Right-handed alpha
Helix 13
AB4
A
217 222Right-handed alpha
Helix 14
AB5
A
234 261Right-handed alpha
Helix 15
AB6
A
269 288Right-handed alpha
Helix 16
AB7
A
291 296Right-handed alpha
Helix 17
AB8
A
297 308Right-handed alpha
Helix 18
AB9
A
313 336Right-handed alpha
Helix 19
AC1
A
341 349Right-handed alpha
Helix 20
AC2
A
349 358Right-handed alpha
Helix 21
AC3
A
361 369Right-handed alpha
Helix 22
AC4
A
370 376Right-handed 310
Helix 23
AC5
A
381 394Right-handed alpha
Helix 24
AC6
A
400 424Right-handed alpha
Helix 25
AC7
A
438 446Right-handed alpha
Helix 26
AC8
A
453 458Right-handed alpha
Helix 27
AC9
A
459 464Right-handed 310
Helix 28
AD1
A
478 483Right-handed alpha
Helix 29
AD2
A
490 498Right-handed 310
Helix 30
AD3
A
499 504Right-handed alpha
Helix 31
AD4
A
515 523Right-handed alpha
Helix 32
AD5
A
527 537Right-handed alpha
Helix 33
AD6
A
538 546Right-handed 310
Helix 34
AD7
A
567 584Right-handed alpha
Helix 35
AD8
A
585 589Right-handed 310
Helix 36
AD9
A
601 609Right-handed alpha
Helix 37
AE1
A
635 640Right-handed alpha
Helix 38
AE2
A
641 656Right-handed alpha
Helix 39
AE3
A
663 669Right-handed alpha
Helix 40
AE4
A
670 672Right-handed 310
Helix 41
AE5
A
712 732Right-handed alpha
Helix 42
AE6
A
757 784Right-handed alpha
Helix 43
AE7
A
815 820Right-handed alpha
Helix 44
AE8
A
832 850Right-handed alpha
Helix 45
AE9
A
854 875Right-handed alpha
Helix 46
AF1
A
884 891Right-handed alpha
Helix 47
AF2
A
895 903Right-handed alpha
Helix 48
AF3
A
916 921Right-handed 310
Helix 49
AF4
A
927 943Right-handed alpha
Helix 50
AF5
A
945 947Right-handed 310
Helix 51
AF6
A
948 954Right-handed alpha
Helix 52
AF7
A
961 968Right-handed alpha
Helix 53
AF8
A
980 996Right-handed alpha
Helix 54
AF9
A
998 1003Right-handed alpha
Helix 55
AG1
A
1008 1021Right-handed alpha
Helix 56
AG2
A
1027 1036Right-handed alpha
Helix 57
AG3
A
1038 1048Right-handed alpha
Helix 58
AG4
A
1052 1059Right-handed alpha
Helix 59
AG5
A
1069 1087Right-handed alpha
Helix 60
AG6
A
1093 1100Right-handed alpha
Helix 61
AG7
A
1105 1118Right-handed alpha
Helix 62
AG8
A
1118 1123Right-handed alpha
Helix 63
AG9
A
1134 1138Right-handed alpha
Helix 64
AH1
A
1150 1156Right-handed alpha
Helix 65
AH2
A
1182 1184Right-handed 310
Helix 66
AH3
A
1213 1230Right-handed alpha
Helix 67
AH4
A
1235 1246Right-handed alpha
Helix 68
AH5
A
1251 1259Right-handed alpha
Helix 69
AH6
A
1266 1274Right-handed alpha
Helix 70
AH7
A
1296 1303Right-handed 310
Helix 71
AH8
A
1315 1331Right-handed alpha
Helix 72
AH9
A
1335 1339Right-handed 310
Helix 73
AI1
A
1350 1353Right-handed 310
Helix 74
AI2
A
1370 1376Right-handed 310
Helix 75
AI3
B
124 149Right-handed alpha
Helix 76
AI4
B
155 166Right-handed alpha
Helix 77
AI5
B
178 183Right-handed alpha
Helix 78
AI6
B
193 206Right-handed alpha
Helix 79
AI7
B
207 209Right-handed 310
Helix 80
AI8
B
220 232Right-handed alpha
Helix 81
AI9
B
237 254Right-handed alpha
Helix 82
AJ1
B
255 269Right-handed alpha
Helix 83
AJ2
B
272 284Right-handed alpha
Helix 84
AJ3
B
285 288Right-handed 310
Helix 85
AJ4
B
304 308Right-handed 310
Helix 86
AJ5
C
125 144Right-handed alpha
Helix 87
AJ6
C
152 167Right-handed alpha
Helix 88
AJ7
D
121 146Right-handed alpha
Helix 89
AJ8
E
124 133Right-handed alpha
Helix 90
AJ9
E
134 146Right-handed alpha
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There are 9 sheets in PDB entry 9IP3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 194first strand
Strand 2
A
227 233anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
398 399first strand
Strand 2
C
145 148anti-parallel
Strand 3
B
174 177anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
549 550first strand
Strand 2
A
675 676parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
734 740first strand
Strand 2
A
743 752anti-parallel
Strand 3
A
623 632anti-parallel
Strand 4
A
793 795anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
798 799first strand
Strand 2
A
806 807anti-parallel
Strand 3
A
810 811anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1139 1144first strand
Strand 2
A
1343 1348anti-parallel
Strand 3
A
1164 1169anti-parallel
Strand 4
A
1292 1295anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1175 1176first strand
Strand 2
A
1186 1187anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1208 1209first strand
Strand 2
A
1390 1391anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
311 313first strand
Strand 2
B
335 338anti-parallel
Strand 3
B
327 329anti-parallel
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