Analysis of interatomic Contacts of Structural Units in PDB entry:
9IP6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9IP6 entry

There are 5 chains in PDB entry 9IP6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 997VAL 1069
C
 ALA 22TYR 82
B
 GLN 996VAL 1069
D
 ALA 22TYR 82
E
 GLN 996VAL 1069
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 9IP6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1008 1021Right-handed alpha
Helix 2
AA2
A
1046 1059Right-handed alpha
Helix 3
AA3
C
80 82Right-handed 310
Helix 4
AA4
B
1008 1021Right-handed alpha
Helix 5
AA5
B
1046 1059Right-handed alpha
Helix 6
AA6
D
80 82Right-handed 310
Helix 7
AA7
E
1008 1021Right-handed alpha
Helix 8
AA8
E
1046 1056Right-handed alpha
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There are 5 sheets in PDB entry 9IP6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1061 1068first strand
Strand 2
A
998 1004anti-parallel
Strand 3
A
1037 1042anti-parallel
Strand 4
A
1025 1031anti-parallel
Strand 5
C
35 42anti-parallel
Strand 6
C
26 32anti-parallel
Strand 7
C
73 78anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
46 50first strand
Strand 2
C
53 57anti-parallel
Strand 3
C
63 64anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1061 1068first strand
Strand 2
B
997 1004anti-parallel
Strand 3
B
1037 1043anti-parallel
Strand 4
B
1025 1031anti-parallel
Strand 5
D
35 42anti-parallel
Strand 6
D
26 32anti-parallel
Strand 7
D
73 78anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
46 50first strand
Strand 2
D
53 57anti-parallel
Strand 3
D
63 64anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1025 1031first strand
Strand 2
E
1037 1043anti-parallel
Strand 3
E
997 1004anti-parallel
Strand 4
E
1061 1069anti-parallel
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