Analysis of interatomic Contacts of Structural Units in PDB entry:
9IQY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9IQY entry

There are 3 chains in PDB entry 9IQY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 PHE 149GLY 467
C
 PRO 373LYS 462
J
 MET 1GLN 180
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 9IQY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
150 161Right-handed alpha
Helix 2
AA2
B
162 167Right-handed 310
Helix 3
AA3
B
168 177Right-handed alpha
Helix 4
AA4
B
182 186Right-handed 310
Helix 5
AA5
B
193 201Right-handed alpha
Helix 6
AA6
B
208 221Right-handed alpha
Helix 7
AA7
B
223 228Right-handed alpha
Helix 8
AA8
B
240 248Right-handed alpha
Helix 9
AA9
B
250 261Right-handed alpha
Helix 10
AB1
B
270 274Right-handed 310
Helix 11
AB2
B
275 279Right-handed 310
Helix 12
AB3
B
287 295Right-handed alpha
Helix 13
AB4
B
297 306Right-handed alpha
Helix 14
AB5
B
323 331Right-handed alpha
Helix 15
AB6
B
335 357Right-handed alpha
Helix 16
AB7
B
361 365Right-handed 310
Helix 17
AB8
B
372 380Right-handed alpha
Helix 18
AB9
B
382 391Right-handed alpha
Helix 19
AC1
B
399 403Right-handed 310
Helix 20
AC2
B
432 440Right-handed alpha
Helix 21
AC3
B
445 450Right-handed alpha
Helix 22
AC4
B
452 466Right-handed alpha
Helix 23
AC5
C
374 381Right-handed alpha
Helix 24
AC6
C
382 391Right-handed alpha
Helix 25
AC7
C
432 439Right-handed alpha
Helix 26
AC8
C
445 450Right-handed alpha
Helix 27
AC9
C
452 462Right-handed alpha
Helix 28
AD1
J
17 28Right-handed alpha
Helix 29
AD2
J
65 70Right-handed alpha
Helix 30
AD3
J
71 74Right-handed 310
Helix 31
AD4
J
89 107Right-handed alpha
Helix 32
AD5
J
118 123Right-handed 310
Helix 33
AD6
J
124 134Right-handed alpha
Helix 34
AD7
J
140 152Right-handed alpha
Helix 35
AD8
J
168 180Right-handed alpha
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There are 3 sheets in PDB entry 9IQY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
405 411first strand
Strand 2
B
414 419anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
405 407first strand
Strand 2
C
417 419anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
42 47first strand
Strand 2
J
52 59anti-parallel
Strand 3
J
4 12parallel
Strand 4
J
79 85parallel
Strand 5
J
112 117parallel
Strand 6
J
155 158parallel
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