Analysis of interatomic Contacts of Structural Units in PDB entry:
9IRJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9IRJ entry

There are 2 chains in PDB entry 9IRJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 6VAL 65
A
 SER 300THR 454
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 9IRJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
57 65Right-handed 310
Helix 2
AA2
A
312 317Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9IRJ.

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
371 374first strand
Strand 2
A
387 398anti-parallel
Strand 3
A
403 414anti-parallel
Strand 4
A
322 330anti-parallel
Strand 5
A
335 345anti-parallel
Strand 6
A
348 358anti-parallel
Strand 7
A
12 22parallel
Strand 8
A
25 36anti-parallel
Strand 9
A
41 50anti-parallel
Strand 10
A
441 451anti-parallel
Strand 11
A
424 435anti-parallel
Strand 12
A
377 384anti-parallel
Strand 13
A
387 398anti-parallel
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