Analysis of interatomic Contacts of Structural Units in PDB entry:
9ITI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ITI entry

There is 1 chain in PDB entry 9ITI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 8ALA 1765
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 9ITI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 34Right-handed alpha
Helix 2
AA2
A
60 64Right-handed 310
Helix 3
AA3
A
67 71Right-handed 310
Helix 4
AA4
A
104 108Right-handed 310
Helix 5
AA5
A
113 124Right-handed alpha
Helix 6
AA6
A
125 144Right-handed alpha
Helix 7
AA7
A
151 175Right-handed alpha
Helix 8
AA8
A
182 185Right-handed 310
Helix 9
AA9
A
186 205Right-handed alpha
Helix 10
AB1
A
210 216Right-handed alpha
Helix 11
AB2
A
217 222Right-handed 310
Helix 12
AB3
A
223 228Right-handed alpha
Helix 13
AB4
A
230 244Right-handed alpha
Helix 14
AB5
A
245 268Right-handed alpha
Helix 15
AB6
A
269 271Right-handed 310
Helix 16
AB7
A
286 291Right-handed alpha
Helix 17
AB8
A
296 303Right-handed alpha
Helix 18
AB9
A
337 341Right-handed 310
Helix 19
AC1
A
346 359Right-handed alpha
Helix 20
AC2
A
362 375Right-handed alpha
Helix 21
AC3
A
378 389Right-handed alpha
Helix 22
AC4
A
389 425Right-handed alpha
Helix 23
AC5
A
729 741Right-handed alpha
Helix 24
AC6
A
742 762Right-handed alpha
Helix 25
AC7
A
769 798Right-handed alpha
Helix 26
AC8
A
799 804Right-handed alpha
Helix 27
AC9
A
806 825Right-handed alpha
Helix 28
AD1
A
833 847Right-handed 310
Helix 29
AD2
A
849 864Right-handed alpha
Helix 30
AD3
A
866 895Right-handed alpha
Helix 31
AD4
A
896 899Right-handed 310
Helix 32
AD5
A
912 926Right-handed alpha
Helix 33
AD6
A
928 940Right-handed alpha
Helix 34
AD7
A
940 974Right-handed alpha
Helix 35
AD8
A
986 1014Right-handed alpha
Helix 36
AD9
A
1176 1191Right-handed alpha
Helix 37
AE1
A
1191 1209Right-handed alpha
Helix 38
AE2
A
1210 1212Right-handed 310
Helix 39
AE3
A
1219 1249Right-handed alpha
Helix 40
AE4
A
1249 1255Right-handed alpha
Helix 41
AE5
A
1256 1279Right-handed alpha
Helix 42
AE6
A
1283 1292Right-handed alpha
Helix 43
AE7
A
1293 1303Right-handed 310
Helix 44
AE8
A
1304 1317Right-handed alpha
Helix 45
AE9
A
1317 1344Right-handed alpha
Helix 46
AF1
A
1366 1377Right-handed alpha
Helix 47
AF2
A
1391 1404Right-handed alpha
Helix 48
AF3
A
1407 1417Right-handed alpha
Helix 49
AF4
A
1430 1432Right-handed 310
Helix 50
AF5
A
1433 1445Right-handed alpha
Helix 51
AF6
A
1445 1467Right-handed alpha
Helix 52
AF7
A
1475 1490Right-handed alpha
Helix 53
AF8
A
1502 1513Right-handed alpha
Helix 54
AF9
A
1514 1534Right-handed alpha
Helix 55
AG1
A
1540 1570Right-handed alpha
Helix 56
AG2
A
1571 1575Right-handed 310
Helix 57
AG3
A
1576 1600Right-handed alpha
Helix 58
AG4
A
1605 1613Right-handed alpha
Helix 59
AG5
A
1616 1621Right-handed alpha
Helix 60
AG6
A
1622 1626Right-handed 310
Helix 61
AG7
A
1627 1667Right-handed alpha
Helix 62
AG8
A
1683 1696Right-handed alpha
Helix 63
AG9
A
1699 1708Right-handed alpha
Helix 64
AH1
A
1731 1765Right-handed alpha
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There are 3 sheets in PDB entry 9ITI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 91first strand
Strand 2
A
97 100anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 277first strand
Strand 2
A
328 332anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1357 1358first strand
Strand 2
A
1349 1352anti-parallel
Strand 3
A
1380 1383anti-parallel
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