Analysis of interatomic Contacts of Structural Units in PDB entry:
9ITW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ITW entry

There are 16 chains in PDB entry 9ITW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
Y
 PRO 8LEU 160
V
 GLY 5ALA 158
U
 GLY 5ALA 159
X
 LEU 10LEU 160
H
 MET 1PHE 72
I
 MET 1PHE 72
J
 MET 1PHE 72
K
 MET 1GLY 73
L
 MET 1GLY 73
M
 MET 1PHE 72
N
 MET 1GLY 73
O
 MET 1GLY 73
P
 MET 1GLY 73
Q
 MET 1GLY 73
T
 ILE 19THR 304
Z
 VAL 12THR 304
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 9ITW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
Y
8 147Right-handed alpha
Helix 2
AA2
Y
149 159Right-handed alpha
Helix 3
AA3
V
7 29Right-handed alpha
Helix 4
AA4
V
29 113Right-handed alpha
Helix 5
AA5
V
115 120Right-handed alpha
Helix 6
AA6
V
122 137Right-handed alpha
Helix 7
AA7
V
148 157Right-handed alpha
Helix 8
AA8
U
7 120Right-handed alpha
Helix 9
AA9
U
120 140Right-handed alpha
Helix 10
AB1
U
148 159Right-handed alpha
Helix 11
AB2
X
11 29Right-handed alpha
Helix 12
AB3
X
30 122Right-handed alpha
Helix 13
AB4
X
122 133Right-handed alpha
Helix 14
AB5
X
135 142Right-handed alpha
Helix 15
AB6
X
142 147Right-handed alpha
Helix 16
AB7
X
149 160Right-handed alpha
Helix 17
AB8
H
3 38Right-handed alpha
Helix 18
AB9
H
41 72Right-handed alpha
Helix 19
AC1
I
3 38Right-handed alpha
Helix 20
AC2
I
41 72Right-handed alpha
Helix 21
AC3
J
3 38Right-handed alpha
Helix 22
AC4
J
41 72Right-handed alpha
Helix 23
AC5
K
3 38Right-handed alpha
Helix 24
AC6
K
41 72Right-handed alpha
Helix 25
AC7
L
3 17Right-handed alpha
Helix 26
AC8
L
18 37Right-handed alpha
Helix 27
AC9
L
38 40Right-handed 310
Helix 28
AD1
L
41 72Right-handed alpha
Helix 29
AD2
M
3 38Right-handed alpha
Helix 30
AD3
M
41 72Right-handed alpha
Helix 31
AD4
N
3 38Right-handed alpha
Helix 32
AD5
N
41 72Right-handed alpha
Helix 33
AD6
O
5 38Right-handed alpha
Helix 34
AD7
O
41 73Right-handed alpha
Helix 35
AD8
P
3 37Right-handed alpha
Helix 36
AD9
P
41 71Right-handed alpha
Helix 37
AE1
Q
3 38Right-handed alpha
Helix 38
AE2
Q
41 72Right-handed alpha
Helix 39
AE3
T
49 72Right-handed alpha
Helix 40
AE4
T
79 99Right-handed alpha
Helix 41
AE5
T
106 124Right-handed alpha
Helix 42
AE6
T
171 178Right-handed 310
Helix 43
AE7
T
186 190Right-handed 310
Helix 44
AE8
T
192 212Right-handed alpha
Helix 45
AE9
T
213 215Right-handed 310
Helix 46
AF1
T
216 221Right-handed alpha
Helix 47
AF2
T
227 268Right-handed alpha
Helix 48
AF3
T
273 304Right-handed alpha
Helix 49
AF4
Z
17 21Right-handed 310
Helix 50
AF5
Z
51 71Right-handed alpha
Helix 51
AF6
Z
79 99Right-handed alpha
Helix 52
AF7
Z
102 124Right-handed alpha
Helix 53
AF8
Z
172 176Right-handed 310
Helix 54
AF9
Z
190 214Right-handed alpha
Helix 55
AG1
Z
214 219Right-handed alpha
Helix 56
AG2
Z
221 225Right-handed 310
Helix 57
AG3
Z
230 268Right-handed alpha
Helix 58
AG4
Z
272 304Right-handed alpha
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There are no sheets in PDB entry 9ITW
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