Analysis of interatomic Contacts of Structural Units in PDB entry:
9IV8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9IV8 entry

There is 1 chain in PDB entry 9IV8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 17ILE 935
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 9IV8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 72Right-handed alpha
Helix 2
AA2
A
98 110Right-handed alpha
Helix 3
AA3
A
110 124Right-handed alpha
Helix 4
AA4
A
130 155Right-handed alpha
Helix 5
AA5
A
165 188Right-handed alpha
Helix 6
AA6
A
196 225Right-handed alpha
Helix 7
AA7
A
600 608Right-handed alpha
Helix 8
AA8
A
656 666Right-handed alpha
Helix 9
AA9
A
684 698Right-handed alpha
Helix 10
AB1
A
708 717Right-handed alpha
Helix 11
AB2
A
738 755Right-handed alpha
Helix 12
AB3
A
761 764Right-handed 310
Helix 13
AB4
A
765 795Right-handed alpha
Helix 14
AB5
A
797 804Right-handed alpha
Helix 15
AB6
A
805 811Right-handed alpha
Helix 16
AB7
A
811 825Right-handed alpha
Helix 17
AB8
A
828 862Right-handed alpha
Helix 18
AB9
A
869 893Right-handed alpha
Helix 19
AC1
A
905 932Right-handed alpha
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There are 9 sheets in PDB entry 9IV8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 80first strand
Strand 2
A
88 94anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 161first strand
Strand 2
A
902 903anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 233first strand
Strand 2
A
240 244anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
437 443first strand
Strand 2
A
389 397anti-parallel
Strand 3
A
372 376anti-parallel
Strand 4
A
484 486parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
380 384first strand
Strand 2
A
492 497parallel
Strand 3
A
454 466anti-parallel
Strand 4
A
404 412anti-parallel
Strand 5
A
426 431anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
568 574first strand
Strand 2
A
520 528anti-parallel
Strand 3
A
504 507anti-parallel
Strand 4
A
670 671parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
511 515first strand
Strand 2
A
676 682parallel
Strand 3
A
585 591anti-parallel
Strand 4
A
535 542anti-parallel
Strand 5
A
557 562anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
511 515first strand
Strand 2
A
676 682parallel
Strand 3
A
585 591anti-parallel
Strand 4
A
535 542anti-parallel
Strand 5
A
595 596anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
598 599first strand
Strand 2
A
623 628anti-parallel
Strand 3
A
613 620anti-parallel
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