Analysis of interatomic Contacts of Structural Units in PDB entry:
9IV9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9IV9 entry

There are 5 chains in PDB entry 9IV9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 5VAL 1451
B
 LYS 525ILE 709
C
 LYS 525PRO 579
D
 LYS 525LYS 595
E
 LYS 525LYS 583
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 67 helices in PDB entry 9IV9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 33Right-handed alpha
Helix 2
AA2
A
43 57Right-handed alpha
Helix 3
AA3
A
60 77Right-handed alpha
Helix 4
AA4
A
79 83Right-handed 310
Helix 5
AA5
A
91 96Right-handed alpha
Helix 6
AA6
A
104 137Right-handed alpha
Helix 7
AA7
A
140 156Right-handed alpha
Helix 8
AA8
A
156 163Right-handed alpha
Helix 9
AA9
A
166 189Right-handed alpha
Helix 10
AB1
A
231 255Right-handed alpha
Helix 11
AB2
A
260 273Right-handed alpha
Helix 12
AB3
A
275 280Right-handed alpha
Helix 13
AB4
A
282 288Right-handed alpha
Helix 14
AB5
A
289 300Right-handed alpha
Helix 15
AB6
A
309 326Right-handed alpha
Helix 16
AB7
A
330 346Right-handed alpha
Helix 17
AB8
A
349 355Right-handed alpha
Helix 18
AB9
A
356 359Right-handed 310
Helix 19
AC1
A
369 382Right-handed alpha
Helix 20
AC2
A
389 409Right-handed alpha
Helix 21
AC3
A
425 433Right-handed alpha
Helix 22
AC4
A
439 446Right-handed alpha
Helix 23
AC5
A
447 451Right-handed 310
Helix 24
AC6
A
479 483Right-handed 310
Helix 25
AC7
A
488 492Right-handed 310
Helix 26
AC8
A
505 511Right-handed alpha
Helix 27
AC9
A
516 526Right-handed alpha
Helix 28
AD1
A
557 574Right-handed alpha
Helix 29
AD2
A
575 580Right-handed 310
Helix 30
AD3
A
587 595Right-handed alpha
Helix 31
AD4
A
725 730Right-handed alpha
Helix 32
AD5
A
731 747Right-handed alpha
Helix 33
AD6
A
753 760Right-handed alpha
Helix 34
AD7
A
780 784Right-handed 310
Helix 35
AD8
A
802 822Right-handed alpha
Helix 36
AD9
A
847 873Right-handed alpha
Helix 37
AE1
A
904 911Right-handed alpha
Helix 38
AE2
A
922 940Right-handed alpha
Helix 39
AE3
A
943 965Right-handed alpha
Helix 40
AE4
A
972 981Right-handed alpha
Helix 41
AE5
A
982 992Right-handed alpha
Helix 42
AE6
A
993 997Right-handed 310
Helix 43
AE7
A
1014 1029Right-handed alpha
Helix 44
AE8
A
1033 1042Right-handed alpha
Helix 45
AE9
A
1049 1056Right-handed alpha
Helix 46
AF1
A
1067 1077Right-handed alpha
Helix 47
AF2
A
1086 1091Right-handed alpha
Helix 48
AF3
A
1097 1110Right-handed alpha
Helix 49
AF4
A
1115 1126Right-handed alpha
Helix 50
AF5
A
1126 1138Right-handed alpha
Helix 51
AF6
A
1155 1179Right-handed alpha
Helix 52
AF7
A
1191 1204Right-handed alpha
Helix 53
AF8
A
1204 1209Right-handed alpha
Helix 54
AF9
A
1236 1242Right-handed alpha
Helix 55
AG1
A
1291 1309Right-handed alpha
Helix 56
AG2
A
1311 1323Right-handed alpha
Helix 57
AG3
A
1329 1337Right-handed alpha
Helix 58
AG4
A
1374 1378Right-handed 310
Helix 59
AG5
A
1391 1407Right-handed alpha
Helix 60
AG6
B
526 574Right-handed alpha
Helix 61
AG7
B
602 609Right-handed 310
Helix 62
AG8
B
659 672Right-handed alpha
Helix 63
AG9
B
674 687Right-handed alpha
Helix 64
AH1
B
690 707Right-handed alpha
Helix 65
AH2
C
526 574Right-handed alpha
Helix 66
AH3
D
526 578Right-handed alpha
Helix 67
AH4
E
526 573Right-handed alpha
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There are 8 sheets in PDB entry 9IV9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 85first strand
Strand 2
A
224 230parallel
Strand 3
A
214 221anti-parallel
Strand 4
A
206 211anti-parallel
Strand 5
A
199 202anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
385 388first strand
Strand 2
E
575 578anti-parallel
Strand 3
B
594 599parallel
Strand 4
B
575 577anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
418 419first strand
Strand 2
A
454 455anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
475 476first strand
Strand 2
A
503 504anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
553 556first strand
Strand 2
A
537 540anti-parallel
Strand 3
A
763 766parallel
Strand 4
A
790 792anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
824 827first strand
Strand 2
A
835 842anti-parallel
Strand 3
A
713 720anti-parallel
Strand 4
A
883 885anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
888 891first strand
Strand 2
A
894 897anti-parallel
Strand 3
A
900 901anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1225 1230first strand
Strand 2
A
1418 1424anti-parallel
Strand 3
A
1246 1251anti-parallel
Strand 4
A
1371 1373anti-parallel
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