Analysis of interatomic Contacts of Structural Units in PDB entry:
9IVW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9IVW entry

There are 2 chains in PDB entry 9IVW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
G
 PHE 161MET 554
F
 PRO 159PRO 695
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 9IVW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
G
189 195Right-handed alpha
Helix 2
AA2
G
250 260Right-handed alpha
Helix 3
AA3
G
273 285Right-handed alpha
Helix 4
AA4
G
301 306Right-handed alpha
Helix 5
AA5
G
310 319Right-handed alpha
Helix 6
AA6
G
322 352Right-handed alpha
Helix 7
AA7
G
352 368Right-handed alpha
Helix 8
AA8
G
370 380Right-handed alpha
Helix 9
AA9
G
382 386Right-handed 310
Helix 10
AB1
G
402 407Right-handed 310
Helix 11
AB2
G
409 438Right-handed alpha
Helix 12
AB3
G
440 460Right-handed alpha
Helix 13
AB4
G
463 476Right-handed alpha
Helix 14
AB5
G
477 486Right-handed alpha
Helix 15
AB6
G
493 509Right-handed alpha
Helix 16
AB7
G
518 523Right-handed 310
Helix 17
AB8
G
531 533Right-handed 310
Helix 18
AB9
G
534 551Right-handed alpha
Helix 19
AC1
F
183 188Right-handed 310
Helix 20
AC2
F
189 195Right-handed alpha
Helix 21
AC3
F
250 259Right-handed alpha
Helix 22
AC4
F
273 285Right-handed alpha
Helix 23
AC5
F
311 319Right-handed alpha
Helix 24
AC6
F
322 339Right-handed alpha
Helix 25
AC7
F
339 351Right-handed alpha
Helix 26
AC8
F
352 368Right-handed alpha
Helix 27
AC9
F
370 380Right-handed alpha
Helix 28
AD1
F
403 407Right-handed 310
Helix 29
AD2
F
408 438Right-handed alpha
Helix 30
AD3
F
440 459Right-handed alpha
Helix 31
AD4
F
464 476Right-handed alpha
Helix 32
AD5
F
477 486Right-handed alpha
Helix 33
AD6
F
493 508Right-handed alpha
Helix 34
AD7
F
518 522Right-handed 310
Helix 35
AD8
F
526 530Right-handed 310
Helix 36
AD9
F
531 533Right-handed 310
Helix 37
AE1
F
534 551Right-handed alpha
Helix 38
AE2
F
581 590Right-handed alpha
Helix 39
AE3
F
613 624Right-handed alpha
Helix 40
AE4
F
656 678Right-handed alpha
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There are 3 sheets in PDB entry 9IVW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
176 177first strand
Strand 2
G
265 266anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
174 176first strand
Strand 2
F
266 268anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
386 387first strand
Strand 2
F
394 395anti-parallel
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