Analysis of interatomic Contacts of Structural Units in PDB entry:
9IWJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9IWJ entry

There are 8 chains in PDB entry 9IWJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 204ILE 447
B
 ALA 201ILE 447
C
 ASP 202ILE 447
D
 SER 197ILE 447
E
 GLY 684TYR 697
F
 GLY 684TYR 697
G
 GLY 684ASP 698
H
 LEU 685TYR 697
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 9IWJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
205 218Right-handed alpha
Helix 2
AA2
A
221 231Right-handed alpha
Helix 3
AA3
A
243 256Right-handed alpha
Helix 4
AA4
A
281 293Right-handed alpha
Helix 5
AA5
A
301 322Right-handed alpha
Helix 6
AA6
A
323 325Right-handed 310
Helix 7
AA7
A
341 345Right-handed alpha
Helix 8
AA8
A
350 354Right-handed 310
Helix 9
AA9
A
355 367Right-handed alpha
Helix 10
AB1
A
371 384Right-handed alpha
Helix 11
AB2
A
393 416Right-handed alpha
Helix 12
AB3
A
421 446Right-handed alpha
Helix 13
AB4
B
202 204Right-handed 310
Helix 14
AB5
B
205 218Right-handed alpha
Helix 15
AB6
B
221 230Right-handed alpha
Helix 16
AB7
B
243 255Right-handed alpha
Helix 17
AB8
B
280 294Right-handed alpha
Helix 18
AB9
B
301 322Right-handed alpha
Helix 19
AC1
B
341 346Right-handed alpha
Helix 20
AC2
B
350 354Right-handed 310
Helix 21
AC3
B
355 367Right-handed alpha
Helix 22
AC4
B
371 384Right-handed alpha
Helix 23
AC5
B
393 416Right-handed alpha
Helix 24
AC6
B
421 446Right-handed alpha
Helix 25
AC7
C
205 218Right-handed alpha
Helix 26
AC8
C
221 229Right-handed alpha
Helix 27
AC9
C
243 255Right-handed alpha
Helix 28
AD1
C
281 293Right-handed alpha
Helix 29
AD2
C
301 322Right-handed alpha
Helix 30
AD3
C
323 325Right-handed 310
Helix 31
AD4
C
341 346Right-handed alpha
Helix 32
AD5
C
350 354Right-handed 310
Helix 33
AD6
C
355 367Right-handed alpha
Helix 34
AD7
C
371 384Right-handed alpha
Helix 35
AD8
C
393 416Right-handed alpha
Helix 36
AD9
C
421 445Right-handed alpha
Helix 37
AE1
D
200 205Right-handed alpha
Helix 38
AE2
D
205 218Right-handed alpha
Helix 39
AE3
D
221 230Right-handed alpha
Helix 40
AE4
D
243 254Right-handed alpha
Helix 41
AE5
D
281 293Right-handed alpha
Helix 42
AE6
D
301 322Right-handed alpha
Helix 43
AE7
D
341 346Right-handed alpha
Helix 44
AE8
D
350 354Right-handed 310
Helix 45
AE9
D
355 367Right-handed alpha
Helix 46
AF1
D
371 384Right-handed alpha
Helix 47
AF2
D
393 416Right-handed alpha
Helix 48
AF3
D
421 446Right-handed alpha
Helix 49
AF4
E
685 694Right-handed alpha
Helix 50
AF5
F
685 695Right-handed alpha
Helix 51
AF6
G
685 694Right-handed alpha
Helix 52
AF7
H
686 694Right-handed alpha
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There are 4 sheets in PDB entry 9IWJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 241first strand
Strand 2
A
337 340parallel
Strand 3
A
329 332anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
239 241first strand
Strand 2
B
337 340parallel
Strand 3
B
329 332anti-parallel
Strand 4
B
325 326anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
239 241first strand
Strand 2
C
337 340parallel
Strand 3
C
329 332anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
239 241first strand
Strand 2
D
337 340parallel
Strand 3
D
329 332anti-parallel
Strand 4
D
325 326anti-parallel
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